Evidence map›Paper›PMID 40774608›Full record

Observational studyJournal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer2025

Prospective Analysis of Mesotheliomas in Subjects With BAP1 Cancer Syndrome: Clinical Characteristics and Epigenetic Correlates of Disease.

Xinwei Wu, Frank Villa Hernandez, Haitao Wang, Ruihong Wang, Stephanie Shiffka, Niharika Shah, Shamus R Carr, Chuong D Hoang, Andrew M Blakely, Alexandra Lebensohn and 21 more

Registry-linked trialAbstract readObservational Study
In one paragraph

Observational study in Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04431024 (Prospective Evaluation of High Resolution Dual Energy Computed Tomographic Imaging, Noninvasive), which is not on this map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04431024 recruitingnot on this map

Prospective Evaluation of High Resolution Dual Energy Computed Tomographic Imaging, Noninvasive (Liquid) Biopsies, and Minimally Invasive Surgical Surveillance for Early Detection of Mesotheliomas in Patients With BAP1 Tumor Predisposition Syndrome

TypeobservationalSponsorNational Cancer Institute (NCI)Ran2021 to 2038Enrolled300ConditionsFamilial Cancer, BRCA1-Associated Protein-1 (BAP1) Mutations, Tumor Predisposition Syndrome (TPDS), Mesothelioma
3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Advances in the Basic Sciences in Thoracic Oncology in the Last 20 Years and Their Translational Impact.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2026
    Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors.

Xinwei WuThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Frank Villa HernandezThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Haitao WangThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Ruihong WangThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Stephanie ShiffkaThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Niharika ShahLaboratory of Pathology, National Institutes of Health, Bethesda, Maryland.
Shamus R CarrThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Chuong D HoangThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Andrew M BlakelySurgical Oncology Program, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Alexandra LebensohnGenetics Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Keerti MishraThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Sichuan XiThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Mary R ZhangThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Tuana TolunayThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Sudheer GaraThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Amanda AbsherThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Deneise FrancisThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Amanda RowlandThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Maureen ConnollyThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Stephanie JacobsProtocol Support Office, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Sandra OrfgenDepartment of Perioperative Medicine, National Institutes of Health, Bethesda, Maryland.
Kevin DriscollDepartment of Perioperative Medicine, National Institutes of Health, Bethesda, Maryland.
Azam GhafoorThoracic and GI Malignancies Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Xiaofan LuInstitute of Genetics and Molecular and Cellular Biology, CNRS/INSERM/UNISTRA, Illkirch, France.
Gabriel G MaloufInstitute of Genetics and Molecular and Cellular Biology, CNRS/INSERM/UNISTRA, Illkirch, France.
Haining YangUniversity of Hawaii, Oahu, Hawaii.
Michele CarboneUniversity of Hawaii, Oahu, Hawaii.
Raffit HassanThoracic and GI Malignancies Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland.
Elizabeth JonesDepartment of Diagnostic Radiology, Clinical Center, National Institutes of Health, Bethesda, Maryland.
Markku MiettinenLaboratory of Pathology, National Institutes of Health, Bethesda, Maryland.
David S SchrumpThoracic Surgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland. Electronic address: David_Schrump@nih.gov.

Funding

Modulating Cancer Stem Cell Signaling in Thoracic MalignanciesZIABC011418 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SCHRUMP, DAVID · 2011 to 2025
$17.4M
Epigenetic Mechanisms of Gene Expression in Thoracic MalignanciesZIABC011115 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SCHRUMP, DAVID · 2009 to 2025
$15.1M
The EDRN Mesothelioma Biomarker Discovery LaboratoryU01CA214195 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI PASS, HARVEY IRA, YANG, HAINING · 2016 to 2021
$3.5M
Mechanisms of BAP1 activity in human cancer developmentR01CA237235 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI CARBONE, MICHELE, YANG, HAINING · 2020 to 2024
$2.1M
Influence of germline mutations on susceptibility to environmental carcinogensR01ES030948 · NIEHS · UNIVERSITY OF HAWAII AT MANOA · PI CARBONE, MICHELE, GRZYMSKI, JOSEPH J · 2019 to 2021
$1.9M
Germline BAP1 Mutations and Malignant Mesothelioma: Mechanisms and Early DetectionR01CA198138 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI CARBONE, MICHELE · 2015 to 2019
$1.7M
Novel strategies to improve mesothelioma therapyR01CA290173 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI MICHELE CARBONE, Robert Taylor Ripley · 2024 to 2026
$1.6M
Intramural NIH HHS ZIA BC011115Intramural NIH HHS ZIA BC011418NCI NIH HHS R01 CA198138NCI NIH HHS R01 CA237235NCI NIH HHS R01 CA290173NCI NIH HHS U01 CA214195NIEHS NIH HHS R01 ES030948
6 · The paper itself

Abstract

introductionAlthough mesotheliomas are the most common malignancies identified in BAP1 cancer syndrome (BCS), the prevalence and natural history of the neoplasms have not been elucidated. Protocol NCT04431024 was initiated to prospectively evaluate whether high-resolution computed tomography (CT) imaging and minimally invasive surgical evaluation could facilitate detection and surveillance of mesotheliomas in subjects with germline BAP1 mutations.

methodsSubjects above or equal to 33 years of age with or without prior malignancies underwent CT imaging followed by bilateral thoracoscopies and laparoscopies. CT imaging and intraoperative findings were objectively scored; surgical biopsies were interpreted by two expert pathologists. Skin, peripheral blood mononuclear cells, plasma, serum, and tumor biopsies were collected for correlative research studies.

resultsA total of 50 subjects with 32 germline BAP1 mutations were enrolled between March 2021 and July 2024. Median follow-up was 21.8 months (range: 1.7-41.1 mo). Furthermore, 16 sites of prior mesothelioma in 15 patients were excluded from the analysis. Surgical evaluation identified diffuse mesotheliomas in 39 of 45 subjects (87%), affecting 63 of 81 hemi-thoraces (78%) and 27 of 32 peritoneal cavities (84%); these mesotheliomas exhibited unique histologic features and slow clinical progression without therapeutic interventions. CT scans were unreliable for detecting or ruling out these mesotheliomas. Common and mutation specific, cancer-associated epigenomic alterations were identified in dermal fibroblasts and peripheral blood mononuclear cells, which correlated with cancer predilection in subjects with BCS.

conclusionsAdult subjects with germline BAP1 mutations exhibit a high prevalence of subclinical, multicompartment mesotheliomas, which may be manifestations of systemic epigenetic burdens. These findings establish a paradigm for longitudinal assessment of subjects with BCS and support further efforts to identify and validate epigenetic biomarkers for the detection and surveillance of mesotheliomas and other malignancies arising in these individuals.

Indexed as

Epigenesis, GeneticMesotheliomaTumor Suppressor ProteinsUbiquitin ThiolesteraseAdultAgedFemaleGerm-Line MutationHumansMaleMiddle AgedPrognosisProspective StudiesBAP1 protein, humanTumor Suppressor ProteinsUbiquitin ThiolesteraseBAP1 cancer syndromeClinical trialEpigeneticsMesothelioma

Identifiers

PMID40774608
PMCPMC12614498

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.