Evidence map›Paper›PMID 40775408›Full record

ArticleDiscover oncology2025

Integrative analysis identifies FBXO5 as a critical mediator of CRPC progression and bone metastatic potential.

Rajnikant Raut, Devesh Srivastava, Amit Kumar Chakraborty, Manish V Bais, Parul Mishra, Ashish Misra

Abstract read
In one paragraph

Article in Discover oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Rajnikant RautDepartment of Biotechnology, Indian Institute of Technology Hyderabad, Kandi, Sangareddy, 502285, India.
Devesh SrivastavaDepartment of Biotechnology, Indian Institute of Technology Hyderabad, Kandi, Sangareddy, 502285, India.
Amit Kumar ChakrabortyDepartment of Translational Dental Medicine, Boston University Henry M. Goldman School of Dental Medicine, 700 Albany Street, Boston, MA, 02118, USA.
Manish V BaisDepartment of Translational Dental Medicine, Boston University Henry M. Goldman School of Dental Medicine, 700 Albany Street, Boston, MA, 02118, USA.
Parul MishraDepartment of Animal Biology, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, India.
Ashish MisraDepartment of Biotechnology, Indian Institute of Technology Hyderabad, Kandi, Sangareddy, 502285, India. ashishmisra@bt.iith.ac.in.

Funding

Science and Engineering Research Board CRG/2022/008672
6 · The paper itself

Abstract

introductionCastration-resistant prostate cancer (CRPC) poses a major clinical challenge due to its aggressive nature, therapeutic resistance, and frequent progression to bone metastasis. Emerging evidence suggests that E3 ubiquitin ligases play a key role in cancer progression, yet their involvement in CRPC remains poorly understood. METHODS AND

resultsIn this study, we employed machine learning (ML) algorithms and integrative bioinformatics approaches to analyze the gene expression profiles of E3 ubiquitin ligases in CRPC patients. Our ML analysis identified FBXO5, TRIM52, PDZRN4, CCNF, TRIM59, and SHPRH as key predictor variables in CRPC. Furthermore, differential expression analysis revealed that FBXO5, TRIM52, CCNF, and PDZRN4 are significantly dysregulated in patient samples exhibiting strong concordance with the ML results. Notably, FBXO5 exhibits robust interactive, survival, and gene expression correlation with BARD1, BRCA1, UHRF1, and SKP2; key regulators of genomic instability and drug resistance in CRPC. Additionally, FBXO5 also exhibits correlative association with CXCR4, a key mediator of prostate cancer bone metastasis. To experimentally validate these in-silico results, we performed functional assays, including cell proliferation, wound healing, and flow cytometry-based cell cycle analysis in FBXO5-knockdown prostate cancer cells. Our results demonstrate that FBXO5 depletion significantly impairs cell proliferation and migration while inducing G1-phase arrest, supporting its oncogenic role in CRPC.

conclusionTaken together, our findings establish FBXO5 as a critical mediator of CRPC progression and bone metastatic potential, underscoring its importance as a promising therapeutic target for this aggressive disease.

Indexed as

Bone metastasisCRPCE3 ligaseFBXO5Machine learningPCaTCGA

Identifiers

PMID40775408
PMCPMC12331571

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.