Evidence map›Paper›PMID 40780579›Full record

ArticleAmerican journal of ophthalmology2025

The Undiagnosed Diseases Network (UDN) Solves Ocular Syndromic Diagnostic Dilemmas.

Rory J Tinker, Logan M Smith, Lisa A Bastarache, Kimberly M Ezell, Yutaka Furuta, Rizwan Hamid, Joy D Cogan, John A Phillips, Karen M Joos, Undiagnosed Diseases Network

Abstract readCase Reports
In one paragraph

Article in American journal of ophthalmology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Rory J TinkerVanderbilt Eye Institute, Division of Medical Genetics and Genomic Medicine (R.J.T., L.A.B., KM.E., Y.F., R.H., J.D.C., J.A.P.), Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Logan M SmithVanderbilt Eye Institute (L.M.S., K.M.J.), Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Lisa A BastaracheVanderbilt Eye Institute, Division of Medical Genetics and Genomic Medicine (R.J.T., L.A.B., KM.E., Y.F., R.H., J.D.C., J.A.P.), Vanderbilt University Medical Center, Nashville, Tennessee, USA; Department of Biomedical Informatics (L.A.B.), Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Kimberly M EzellVanderbilt Eye Institute, Division of Medical Genetics and Genomic Medicine (R.J.T., L.A.B., KM.E., Y.F., R.H., J.D.C., J.A.P.), Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Yutaka FurutaVanderbilt Eye Institute, Division of Medical Genetics and Genomic Medicine (R.J.T., L.A.B., KM.E., Y.F., R.H., J.D.C., J.A.P.), Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Rizwan HamidVanderbilt Eye Institute, Division of Medical Genetics and Genomic Medicine (R.J.T., L.A.B., KM.E., Y.F., R.H., J.D.C., J.A.P.), Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Joy D CoganVanderbilt Eye Institute, Division of Medical Genetics and Genomic Medicine (R.J.T., L.A.B., KM.E., Y.F., R.H., J.D.C., J.A.P.), Vanderbilt University Medical Center, Nashville, Tennessee, USA.
John A PhillipsVanderbilt Eye Institute, Division of Medical Genetics and Genomic Medicine (R.J.T., L.A.B., KM.E., Y.F., R.H., J.D.C., J.A.P.), Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Karen M JoosVanderbilt Eye Institute (L.M.S., K.M.J.), Vanderbilt University Medical Center, Nashville, Tennessee, USA; Department of Biomedical Engineering (K.M.J.), Vanderbilt University, Nashville, Tennessee, USA. Electronic address: karen.joos@vumc.org.
Undiagnosed Diseases Network

Funding

Vanderbilt Center for Undiagnosed Diseases (VCUD) - BiorepositoryU01HG007674 · NHGRI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI COGAN, JOY D, HAMID, RIZWAN · 2014 to 2022
$13.7M
Overall: Eunice Kennedy Shriver Intellectual and Developmental Disabilities Research Center at VanderbiltP50HD103537 · NICHD · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Jeffrey L Neul · 2020 to 2026
$10.3M
T32 training grant in medical genetics.T32GM082773 · NIGMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Laszlo Tamas Kozicz, Eva Morava-Kozicz · 2008 to 2026
$4.9M
Translating the Clinical Knowledge of Mendelian Diseases to Real-world EHR Data to Improve Identification of Undiagnosed PatientsR01HG012657 · NHGRI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Lisa Bastarache, Douglas Ruderfer · 2022 to 2026
$4.3M
Vanderbilt Center of Excellence for Undiagnosed Disease (VCEUD)U01NS134349 · NINDS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Lisa Bastarache, JOY D COGAN · 2023 to 2026
$3.8M
NHGRI NIH HHS R01 HG012657NHGRI NIH HHS U01 HG007674NICHD NIH HHS P50 HD103537NIGMS NIH HHS T32 GM082773NINDS NIH HHS U01 NS134349
6 · The paper itself

Abstract

purposeThe multicenter NIH-funded Undiagnosed Diseases Network (UDN) exists to diagnose puzzling and newly discovered conditions. We report the UDN's assistance in diagnosing perplexing ocular disorders along with 6 case illustrations.

designRetrospective Interventional Case Series. SUBJECTS: Participants with ocular phenotypes who had applied and were accepted into the UDN with detailed supporting letters written by ophthalmologists or other clinicians when clinically indicated genetic and laboratory testing results were not diagnostic.

methodsHuman Phenotype Ontology Codes were used to identify and categorize subjects with ocular phenotypes. Advanced genomic technologies (exome, genome, mitochondrial and RNA sequencing, X-inactivation analysis, immunoblot analysis) were available for diagnoses.

main outcome measureProportion of cases solved by the UDN in subjects manifesting an ophthalmic component of their undiagnosed disorder.

resultsThe national UDN diagnostic rate for subjects with an eye phenotype was 40.2% (452 of 1123); the diagnostic rate for the other subjects (without an eye) phenotype was 27.8% (276 of 992). In univariate analysis, having an eye phenotype was significantly associated with receiving a diagnosis (odds ratio [OR] = 1.75; CI = 1.45-2.10; P = 2.28e-09). Of 58 eye diagnosed cases/104 total diagnosed cases at the Vanderbilt UDN site, 6 will be discussed more fully. Vanderbilt UDN cases include an autosomal dominant glaucoma with a variant in TEK/TIE2; a de novo heterozygous variant in PRPS1 causing microcornea and glaucoma with skewed X-inactivation affecting a female; a homozygous variant in NADK2 causing optic nerve atrophy; autosomal recessive variants in EPG5 resulting in optic nerve atrophy and cone-rod dystrophy; and a rare de novo variant in COG4 causing a cataract/ retinitis pigmentosa/ nystagmus phenotype. EPG5 and COG4 are not present on inherited retinal disease panels.

conclusionsThe UDN is a national resource available to increase solving undiagnosed diseases including those with ocular phenotypes, facilitate research on undiagnosed diseases, and create a collaboration to improve care options for patients with undiagnosed diseases. Clinicians including ophthalmologists can collaborate with the UDN to solve challenging ocular mysteries using genomic technologies.

Indexed as

Eye DiseasesUndiagnosed DiseasesAdolescentAdultChildFemaleGenetic TestingHumansMaleMiddle AgedPhenotypeRetrospective StudiesUnited States

Identifiers

PMID40780579
PMCPMC12803444

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.