Evidence map›Paper›PMID 40787195›Full record

ArticleFrontiers in bioengineering and biotechnology2025

Evaluation of the effects of clearing agents, fixation, and process durations on cardiovascular tissue imaging with second harmonic generation and multi-photon modalities.

Maedeh Makki, Zachary A Molander, Sergio A Pineda-Castillo, Devin W Laurence, Shubhra Singhal, Yasmin Eltwafsha, Gerhard A Holzapfel, Tingting Gu, Chung-Hao Lee

Abstract read
In one paragraph

Article in Frontiers in bioengineering and biotechnology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Maedeh MakkiBiomechanics and Biomaterials Design Laboratory (BBDL), Department of Bioengineering, The University of California, Riverside (UCR), Riverside, CA, United States.
Zachary A MolanderBiomechanics and Biomaterials Design Laboratory (BBDL), Department of Bioengineering, The University of California, Riverside (UCR), Riverside, CA, United States.
Sergio A Pineda-CastilloDepartment of Biomedical Engineering, University of Minnesota, Minneapolis, MN, United States.
Devin W LaurenceDepartment of Anesthesiology and Critical Care, Children's Hospital of Philadelphia (CHOP), Philadelphia, PA, United States.
Shubhra SinghalBiomechanics and Biomaterials Design Laboratory (BBDL), Department of Bioengineering, The University of California, Riverside (UCR), Riverside, CA, United States.
Yasmin EltwafshaBiomechanics and Biomaterials Design Laboratory (BBDL), Department of Bioengineering, The University of California, Riverside (UCR), Riverside, CA, United States.
Gerhard A HolzapfelInstitute of Biomechanics, Graz University of Technology, Graz, Austria.
Tingting GuSchool of Biological Sciences, The University of Oklahoma, Norman, OK, United States.
Chung-Hao LeeBiomechanics and Biomaterials Design Laboratory (BBDL), Department of Bioengineering, The University of California, Riverside (UCR), Riverside, CA, United States.

Funding

Improving outcomes in endovascular treatment of intracranial aneurysms: Combining additive manufacturing, in-silico modeling, and shape memory polymersR01HL159475 · NHLBI · UNIVERSITY OF OKLAHOMA · PI Chung-Hao Lee · 2022 to 2026
$3.3M
Integrate Data-Driven Modeling and Multi-scale Measures Towards Tissue FunctionR01GM157589 · NIGMS · LEHIGH UNIVERSITY · PI YUE YU · 2024 to 2026
$890k
American Heart Association-American Stroke Association 16SDG27760143American Heart Association-American Stroke Association 24IVPHA1283213 - CHUNG-HAO LEENHLBI NIH HHS R01 HL159475NIGMS NIH HHS R01 GM157589
6 · The paper itself

Abstract

Introduction: Protocols for tissue clearing have been established and optimized for the central nervous system. However, significant modifications are required for clearing different tissue types. Therefore, effective optical clearing for cardiovascular tissue remains a major challenge. The goal of this study is to better understand the responses of porcine left anterior descending artery (LADA) to label-free multiphoton imaging. Methods: To this end, the effects of different clearing methods (i.e., benzyl alcohol benzyl benzoate-BABB and glycerol), formalin fixation, variations in formalin fixation times (0-240 min), and extended storage in BABB (up to 14 days) are investigated. We compare tissue characteristics under different conditions (e.g., tissue clearing reagent and/or tissue fixation), particularly with regard to tissue preservation and transparency across z-stacks (i.e., imaging depths). Results: The glycerol clearing method exhibited relatively lower tissue transparency, whereas BABB increased mean AF-AUC from 0.0035 ± 0.0009 to 0.1205 ± 0.0168 and SHG-AUC from 0.0003 ± 0.0002 to 0.0072 ± 0.0040 ( Discussion: These findings establish BABB as the superior, label-free clearing agent for deep 3D multiphoton microscopy/second harmonic generation imaging of cardiovascular tissue and underscore the necessity of tailoring fixation parameters to the chosen clearing method.

Indexed as

benzyl alcohol benzyl benzoate (BABB) clearingcardiovascular tissueformalin fixationleft anterior descending arterymulti-photon imagingsecond harmonic generation imaging

Identifiers

PMID40787195
PMCPMC12331724

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.