Evidence map›Paper›PMID 40790234›Full record

ArticleDiabetology & metabolic syndrome2025

Multi-omics and experimental validation studies reveal key biomarkers of cellular senescence in diabetic retinopathy.

Jinju Li, Hao Yang, Yixuan Lin, Zhaohui Fang

Abstract read
In one paragraph

Article in Diabetology & metabolic syndrome, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Jinju Li *The First Clinical Medical College, Anhui University of Chinese Medicine, Hefei, 230031, Anhui, China.
Hao Yang *Department of Rheumatology, The Second Affiliated Hospital of Anhui University of Chinese Medicine, Hefei, 230000, Anhui, China.
Yixuan LinDepartment of Endocrinology, The First Affiliated Hospital of Anhui University of Chinese Medicine, Hefei, 230031, Anhui, China. 739093358@qq.com.
Zhaohui FangDepartment of Endocrinology, The First Affiliated Hospital of Anhui University of Chinese Medicine, Hefei, 230031, Anhui, China. fzh9097@163.com.

Funding

Anhui Higher Education Research Project 2023AH050867the National Natural Science Foundation of China 82174153the Project of the Research Institute of Health of Hefei Comprehensive National Science Centre 2023CXMMTCM003
6 · The paper itself

Abstract

objectiveDiabetic retinopathy (DR) is a prevalent microvascular complication of diabetes, contributing to vision impairment and related retinal diseases. Growing evidence indicates that cellular senescence (CS) under high-glucose conditions plays a role in the pathogenesis of DR. This study aims to identify key biomarkers of CS in DR by integrating transcriptomics, single-cell sequencing data, and experimental validation, thereby offering insights for understanding the disease mechanism and developing novel therapeutic strategies.

methodsDR-related datasets and CS-related genes (CSRGs) were retrieved from the Gene Expression Omnibus (GEO) and CellAge databases. The characteristic gene set for DR-CS was obtained by intersecting differentially expressed genes (DEGs), Weighted Gene Co-expression Network Analysis (WGCNA) results, and CSRGs. Subsequent analyses involved constructing protein-protein interaction (PPI) network, cytoHubba screening, enrichment analysis, and immune infiltration analysis. Machine learning methods were used to identify key biomarkers from the DR-CS characteristic gene set, which were then validated using external datasets. Single-cell sequencing and gene set enrichment analysis (GSEA) were employed to determine the cellular location and biological functions of DR-CS key biomarkers, and animal experiments further validated these biomarkers.

resultsA total of 67 DR-CS-related characteristic genes were identified. Enrichment analysis highlighted pathways like cellular senescence and the Advanced Glycation Endproducts-Receptor for Advanced Glycation Endproducts (AGE-RAGE) signaling pathway in diabetic complications as being closely related to DR development. A set of 13 characteristic genes was selected through a combination of PPI network and six cytoHubba algorithms. Further analysis using machine learning, expression analysis, and Receiver Operating Characteristic (ROC) analysis revealed MYC and LOX as key biomarkers of DR-CS. The expression characteristics of MYC and LOX in various cells were examined using single-cell RNA sequencing. Animal experiments demonstrated that the expression levels of MYC and LOX in the retina were significantly higher in DR group than in the control group (P < 0.05).

conclusionMYC and LOX were identified as key biomarkers of DR-CS. Thus, investigating these genes may provide new therapeutic targets for DR treatment by targeting cellular senescence.

Indexed as

BioinformaticsCellular senescenceDiabetic retinopathyKey biomarkers

Identifiers

PMID40790234
PMCPMC12341235

What Socratic holds

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.