Evidence map›Paper›PMID 40794131›Full record

ArticleNeuroradiology2025

Tumor location, genomic alterations, and radiomic features as predictors of survival in glioblastoma: a Multi-Modal analysis.

Kavita Kundal, K Venkateswara Rao, Sandeep Kumar Dhanda, Neeraj Kumar, Rahul Kumar

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Article in Neuroradiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Kavita KundalDepartment of Biotechnology, Indian Institute of Technology Hyderabad, Kandi, Sangareddy, India.
K Venkateswara RaoBasavatarakam Indo American Cancer Hospital & Research Institute, Hyderabad, India.
Sandeep Kumar DhandaSt. Jude Children's Research Hospital, Memphis, TN, USA.
Neeraj KumarDepartment of Biotechnology, Indian Institute of Technology Hyderabad, Kandi, Sangareddy, India.
Rahul KumarDepartment of Biotechnology, Indian Institute of Technology Hyderabad, Kandi, Sangareddy, India. rahulk@bt.iith.ac.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThis study aims to identify the impact of tumor location on the survival of glioblastoma (GBM) patients and the associated genetic alterations, using MRI scans from The Cancer Imaging Archive (TCIA) and genomic data from The Cancer Genome Atlas (TCGA). It also seeks to uncover non-invasive radiomic markers related to poor survival outcome for improved prognosis and treatment planning.

methodsWe analysed pre-operative MRI scans and genomic data from 123 GBM patients (TCIA and TCGA). Tumor locations were determined using our in-house tool, "tumorVQ", followed by Kaplan-Meier survival analysis based on tumor position. Genomic analysis included somatic mutations, copy number variations, fusion genes, and differential gene expression to identify factors linked to poor survival. We extracted radiomic features from T1ce MRI scans using pyRadiomics to analyse their relationship with survival outcomes.

resultsKaplan-Meier analysis showed worse survival for tumors in the parietal lobe compared to other lobes, especially frontal lobe tumors. Genomic analysis revealed high prevalence of PTEN mutations, and exclusive fusion genes FGFR3-TACC3 and EGFR-SEPT14 in parietal lobe tumors. Differential gene expression showed upregulation of PITX2, HOXB13, and DTHD1, linked to tumor progression, while ALOX15 downregulation increased relapse risk. Copy number alterations, like LINC00290 deletions, were associated with aggressive parietal lobe tumors. Radiomic features, lower GLDM DependanceEntropy (LLL) and higher FirstOrder Mean (HLL), were strongly linked to increase risk.

conclusionThis study highlights poor survival outcomes in GBM patients with parietal lobe tumors. Key genetic alterations, such as PTEN mutations and fusion genes, drive tumor progression and chemoresistance in parietal lobe tumors. The association between radiomic features and survival indicates their potential as non-invasive prognostic biomarkers, which could aid in personalized treatment and improved patient management.

Indexed as

Brain NeoplasmsGlioblastomaMagnetic Resonance ImagingAdultAgedDNA Copy Number VariationsFemaleGenomicsHumansMaleMiddle AgedMutationPrognosisRadiomicsSurvival RateAnatomical locationClinical outcomeGenomicsGlioblastomaRadiomics

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.