Evidence map›Paper›PMID 40799622›Full record

ArticleSynthetic biology (Oxford, England)2025

A Golden Gate compatible system for continuous directed evolution in

Ignacio Sparrow Muñoz, Steven J Burgess

Abstract read
In one paragraph

Article in Synthetic biology (Oxford, England), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Ignacio Sparrow MuñozDepartment of Plant Biology, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA.ORCID https://orcid.org/0000-0002-1157-1891
Steven J BurgessDepartment of Plant Biology, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA.ORCID https://orcid.org/0000-0003-2353-7794

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Directed evolution is a technique that allows for protein engineering without prior knowledge. Continuous directed evolution employs gene-specific hypermutation tied to functional selection within a single cell, enabling a broad search of sequence space for gene variants with improved or novel functions. However, currently available techniques for continuous directed evolution can be inflexible or laborious to establish. To address this issue, we present a modular toolkit for deaminase-fused viral RNA polymerase continuous directed evolution, based on Golden Gate assembly. We include an alternative RNA polymerase from phage SP6 and show that it can introduce gene-specific mutations. This work builds on the available repertoire of synthetic biology techniques, brings accessibility and versatility to directed evolution, and enables researchers to build custom and complex plasmids for their own evolutionary campaigns.

Indexed as

continuous directed evolutionGolden Gatesynthetic biologytoolkit

Identifiers

PMID40799622
PMCPMC12342904

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.