Evidence map›Paper›PMID 40802076›Full record

ArticlePlanta2025

Vacuolar compartments preserved among loosely packed amyloplasts account for heat-induced rice chalky formation under low nitrogen conditions.

Yuto Hatakeyama, Kenichi Wakamatsu, Akio Tanaka, Taku Tanogashira, Hiroshi Nonami, Hiroshi Nakano, Hiroshi Wada

Abstract read
In one paragraph

Article in Planta, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yuto HatakeyamaKyushu Okinawa Agricultural Research Center, National Agriculture and Food Research Organization, Chikugo, Fukuoka, Japan. hatakey@agr.ehime-u.ac.jp.
Kenichi WakamatsuKagoshima Prefectural Institute for Agricultural Development, Minamisatsuma, Kagoshima, Japan.
Akio TanakaKagoshima Prefectural Institute for Agricultural Development, Minamisatsuma, Kagoshima, Japan.
Taku TanogashiraKagoshima Prefectural Institute for Agricultural Development, Minamisatsuma, Kagoshima, Japan.
Hiroshi NonamiGraduate School of Agriculture, Ehime University, Matsuyama, Ehime, Japan.
Hiroshi NakanoKyushu Okinawa Agricultural Research Center, National Agriculture and Food Research Organization, Chikugo, Fukuoka, Japan.
Hiroshi WadaKyushu Okinawa Agricultural Research Center, National Agriculture and Food Research Organization, Chikugo, Fukuoka, Japan. hwada@agr.ehime-u.ac.jp.ORCID http://orcid.org/0000-0003-0510-5744

Funding

JSPS KAKENHI JP16H02533JSPS KAKENHI JP22H00369JSPS KAKENHI JP25K01998
6 · The paper itself

Abstract

MAIN

conclusionThe regulation of vacuolar compartmentation and protein synthesis during the early ripening stage might be responsible for rice appearance at high temperature. High temperature at the early ripening stage disrupts protein synthesis to arrest starch and storage protein accumulation in the rice endosperms, leading to the occurrence of chalky kernels (CK), such as white-back kernels (WBK) and basal-white kernels (BWK). In contrast, adequate nitrogen (N) application might sustain protein synthesis and reduce chalky kernels. These processes might be associated with the regulation of vacuolar compartmentation and protein synthesis during heat adaptation, yet the exact cellular dynamics behind the reduction of endosperm air space when applying N have not been examined in the fields. In this study, plants at different N levels were treated under the same high temperatures in the fields and morphological analysis were carried out to examine the time course of changes in organelles compartmentation during the N-enhanced mitigation process. Light and transmission electron microscopic observations were conducted at dorsal and basal endosperm cells, at which chalky formation was presumed to occur under low N conditions during kernel development at high temperature. Results show that CK reached 25.0% in no N-applied plants under heat, whereas N treatment contrastingly decreased CK formation down to 10.7%. In the mature kernels, the areas of chalky cells, amyloplasts, and protein bodies (PBs) were smaller in chalky cells, compared with translucent cells. At the middle ripening stage, volumetric enlargement of protein storage vacuole concomitant with the arrested amyloplast development were both observed in the putative growing chalky cells, resulting in the formation of CK at the late ripening stage. In contrast, N application ameliorated the effect on rice appearance by diminishing the vacuolar size and enhancing protein synthesis to ensure cell size and amyloplast and PB development, increasing the transparency. Therefore, it is proposed that regulation of vacuolar compartmentation and protein synthesis at the ripening stage might be responsible for rice appearance under field conditions.

Indexed as

NitrogenOryzaPlastidsVacuolesEndospermHot TemperaturePlant ProteinsNitrogenPlant ProteinsAmyloplastChalkinessHigh temperatureNitrogenOrganelleOryza sativa L.Protein bodyVacuole

Identifiers

PMID40802076
PMCPMC12350539

What Socratic holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.