Evidence map›Paper›PMID 40810965›Full record

ArticleGenetica2025

Structural and transcriptional characterization of Thaumatin-Like Proteins in Cenostigma pyramidale under salt stress.

Maria Cidinaria Silva Alves, Carlos André Dos Santos-Silva, Carolline de Jesús-Pires, Flávia Czekalski de Araújo, José Ribamar Costa Ferreira-Neto, Gabriella Frosi, Marx Oliveira-Lima, Fernanda Alves de Andrade, Ana Maria Benko-Iseppon, Valesca Pandolfi

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In one paragraph

Article in Genetica, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Maria Cidinaria Silva AlvesGenetics Department, Center of Biosciences, Federal University of Pernambuco, Recife, Pernambuco, Brazil. cidinaria.alves@ufpe.br.ORCID http://orcid.org/0000-0003-0625-416X
Carlos André Dos Santos-SilvaDepartment of Biomedical Sciences, Cesmac University Center, Maceió, Alagoas, Brazil.ORCID http://orcid.org/0000-0003-0020-9763
Carolline de Jesús-PiresGenetics Department, Center of Biosciences, Federal University of Pernambuco, Recife, Pernambuco, Brazil.ORCID http://orcid.org/0000-0001-9023-2224
Flávia Czekalski de AraújoGenetics Department, Center of Biosciences, Federal University of Pernambuco, Recife, Pernambuco, Brazil.ORCID http://orcid.org/0000-0002-6042-4791
José Ribamar Costa Ferreira-NetoGenetics Department, Center of Biosciences, Federal University of Pernambuco, Recife, Pernambuco, Brazil.ORCID http://orcid.org/0000-0003-0935-203X
Gabriella FrosiThe Douglas Research Centre, Montreal, Quebec, Canada.ORCID http://orcid.org/0000-0003-2538-4787
Marx Oliveira-LimaVale Institute of Technology, Belém, PA, Brazil.ORCID http://orcid.org/0000-0003-2021-6805
Fernanda Alves de AndradeGenetics Department, Center of Biosciences, Federal University of Pernambuco, Recife, Pernambuco, Brazil.ORCID http://orcid.org/0009-0004-0299-6937
Ana Maria Benko-IsepponGenetics Department, Center of Biosciences, Federal University of Pernambuco, Recife, Pernambuco, Brazil.ORCID http://orcid.org/0000-0002-0575-3197
Valesca PandolfiGenetics Department, Center of Biosciences, Federal University of Pernambuco, Recife, Pernambuco, Brazil. valesca.pandolfi@ufpe.br.ORCID http://orcid.org/0000-0003-2283-5669

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Thaumatin-Like Proteins (TLPs) play a crucial role against biotic and abiotic stresses, acting as signaling molecules in transduction pathways and exhibiting antimicrobial activity. The present study aimed to characterize TLPs of Cenostigma pyramidale (Fabaceae) and analyze their expression (RNA-Seq) in root tissues under salt stress. A total of 36 CpTLPs were identified, which showed the characteristic TLP domain and a signal peptide in the N-terminal region. Multiple sequence alignment revealed the conservation of 16 cysteine residues, a signature motif, and a "REDDD" motif, all characteristic of TLPs. Three typical TLPs domains were identified in the three-dimensional modeling of the six analyzed sequences. The molecular dynamics simulation revealed stability along most of these sequences. RNA-seq under salt stress showed that six C. pyramidale TLPs (CpTLP2, CpTLP3, CpTLP5, CpTLP17, CpTLP20, and CpTLP31) were differentially expressed. The RT-qPCR expression validation was performed in leaf and root tissues (30 min, 2 h, and 11 days after salt stress). In leaf tissue, most CpTLPs were induced in at least one time point analyzed. In root tissue, we observed validation of the RNA-Seq expression data of CpTLP3, CpTLP5, CpTLP20, and CpTLP31, as well as distinct expression patterns between leaf and root tissues. Our results showed significant variations in the transcriptional response of the TLP family across different plant tissues and associated specific genes of this family with salt tolerance in C. pyramidale. These findings enhance the understanding of the role of TLPs in salt stress and may be useful in genetic improvement strategies to increase salt tolerance.

Indexed as

Plant ProteinsSalt StressAmino Acid SequenceGene Expression Regulation, PlantMolecular Dynamics SimulationPhylogenyPlant LeavesPlant RootsSalt TolerancePlant Proteinsthaumatin protein, plantOsmotinPathogenesis relatedPR-5SalinityTLP

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.