Evidence map›Paper›PMID 40817173›Full record

ArticleEMBO reports2025

RagB stimulates the activity of the peptidoglycan polymerase RodA in Bacillus subtilis.

Frédérique Pompeo, Elodie Foulquier, Arnaud Chastanet, Leon Espinosa, Cyrille Billaudeau, Anthony Rodrigues, Charlène Cornilleau, Rut Carballido-López, Anne Galinier

Abstract read
In one paragraph

Article in EMBO reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. The phenotypic landscape of the model firmicuteProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. A broadly conserved gram-positive lipoprotein regulates cell elongation.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Review
  4. ThebioRxiv : the preprint server for biology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Frédérique PompeoAix-Marseille Univ, CNRS, LCB, UMR 7283, IMM, Marseille, France. fpompeo@imm.cnrs.fr.ORCID 0009-0006-4452-0130
Elodie FoulquierAix-Marseille Univ, CNRS, LCB, UMR 7283, IMM, Marseille, France.
Arnaud ChastanetUniversité Paris-Saclay, INRAE, AgroParisTech, Micalis Institute, Jouy-en-Josas, France.ORCID 0000-0003-0320-4861
Leon EspinosaAix-Marseille Univ, CNRS, LCB, UMR 7283, IMM, Marseille, France.
Cyrille BillaudeauUniversité Paris-Saclay, INRAE, AgroParisTech, Micalis Institute, Jouy-en-Josas, France.ORCID 0000-0002-6161-4968
Anthony RodriguesAix-Marseille Univ, CNRS, LCB, UMR 7283, IMM, Marseille, France.ORCID 0009-0002-4715-0252
Charlène CornilleauUniversité Paris-Saclay, INRAE, AgroParisTech, Micalis Institute, Jouy-en-Josas, France.ORCID 0009-0005-6591-8706
Rut Carballido-LópezUniversité Paris-Saclay, INRAE, AgroParisTech, Micalis Institute, Jouy-en-Josas, France.ORCID 0000-0001-9383-8811
Anne GalinierAix-Marseille Univ, CNRS, LCB, UMR 7283, IMM, Marseille, France.ORCID 0000-0001-5988-016X

Funding

Agence Nationale de la Recherche (ANR) ANR-19-CE15-0011-01EC | ERC | HORIZON EUROPE European Research Council (ERC) agreement ID: 772178PPIA 4D-OMICS 21-ESRE-0052
6 · The paper itself

Abstract

The bacterial cell wall is primarily composed of peptidoglycan (PG), a polymer essential for its protective envelope function, and any defect in its synthesis or repair can potentially result in bacterial lysis. Class A Penicillin-Binding Proteins (aPBPs) and Shape, Elongation, Division, and Sporulation (SEDS) proteins are PG polymerases acting in concert to ensure bacterial cell wall growth. Here, we identify the first regulator of the SEDS protein RodA in the Gram-positive model bacterium Bacillus subtilis. In the presence of the antibiotic moenomycin, which specifically inhibits glycosyltransferase activity of aPBPs, or in a strain deleted for all four aPBPs, bacterial survival depends on the presence of the YrrS protein (renamed RagB) and can be rescued by overexpression of RodA. No effect of RagB is observed on the rodA gene expression level or on the speed of circumferentially moving RodA associated with PG elongation by the Rod complex. However, we demonstrate that RagB interacts with RodA. We propose that RagB stimulates RodA activity and becomes essential in the absence of aPBPs and in particular of the major aPBP, PBP1.

Indexed as

Bacillus subtilisBacterial ProteinsPenicillin-Binding ProteinsPeptidoglycan GlycosyltransferaseAnti-Bacterial AgentsCell WallGene Expression Regulation, BacterialOligosaccharidesPeptidoglycanAnti-Bacterial AgentsBacterial ProteinsmoenomycinOligosaccharidesPenicillin-Binding ProteinsPeptidoglycanPeptidoglycan GlycosyltransferaseaPBPBacillus subtilisPeptidoglycan SynthesisRegulationSEDS

Identifiers

PMID40817173
PMCPMC12457691

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.