Evidence map›Paper›PMID 40830197›Full record

ArticleScientific reports2025

Machine learning-based construction of Immunogenic cell death-related score for improving prognosis and personalized treatment in glioma.

Guoyin Li, Yukui Zhao, Yubo He, Zhaoqiang Qian, Yiwen Liu, Xiaoyan Li, Lili Li, Zhiqiang Liu

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Guoyin Li *Key Laboratory of Modern Teaching Technology, Ministry of Education, Shaanxi Normal University, No. 199 Chang'an South Road, Xi'an, 710062, Shaanxi, China.
Yukui Zhao *Key Laboratory of Modern Teaching Technology, Ministry of Education, Shaanxi Normal University, No. 199 Chang'an South Road, Xi'an, 710062, Shaanxi, China.
Yubo He *Department of Neurosurgery, Shanxi Provincial People's Hospital, Taiyuan, 030000, Shanxi, China.
Zhaoqiang QianCollege of Life Sciences, Shaanxi Normal University, Xi'an, 710062, China.
Yiwen LiuKey Laboratory of Modern Teaching Technology, Ministry of Education, Shaanxi Normal University, No. 199 Chang'an South Road, Xi'an, 710062, Shaanxi, China.
Xiaoyan LiDepartment of Blood Transfusion, Heping Branch, Shanxi Provincial People's Hospital, Taiyuan, 030000, Shanxi, China.
Lili LiCollege of Life Science and Agronomy, Zhoukou Normal University, No. 6, Wenchang Road, Chuanhui District, Zhoukou, 466001, Henan, China. lilili@zknu.edu.cn.
Zhiqiang LiuKey Laboratory of Modern Teaching Technology, Ministry of Education, Shaanxi Normal University, No. 199 Chang'an South Road, Xi'an, 710062, Shaanxi, China. liuzhiqiang@snnu.edu.cn.

Funding

General Project of Shanxi Natural Science Foundation 202303021211061Innovation Capability Support Program of Shaanxi 2021PT-055Youth Research Project of Shanxi Natural Science Foundation 202303021212349
6 · The paper itself

Abstract

Immunogenic cell death (ICD) is capable of activating both innate and adaptive immune responses. In this study, we aimed to develop an ICD-related signature in glioma patients and facilitate the assessment of their prognosis and drug sensitivity. Consensus clustering and non-negative matrix factorization (NMF) were performed to classify patients into subgroups. A least absolute shrinkage and selection operator (LASSO) logistic regression model was constructed to establish an ICD-related risk score (ICDS). CIBERSORT and ESTIMATE algorithms were employed to evaluate the infiltration of immune cells. Flow cytometry, CCK-8, EdU, and Transwell assays were used to detect cell proliferation and migration abilities. qPCR, Western blotting, immunohistochemistry and immunofluorescence were utilized to detect mRNA and protein expression levels. The ICDS proved effective in predicting the prognosis of glioma patients in both the training and two validating cohorts. The ICDS exhibited significant advantages when compared to the 71 previously published signatures. Patients with a high ICDS score demonstrated marked enhancement in immune cell infiltration and expression of immune checkpoint inhibitor-related genes. Furthermore, SERPINH1, one of the 14 key genes used to establish the ICDS, was abnormally overexpressed in gliomas and activate JAK/STAT signaling, thereby promoting glioma cell proliferation and migration. We developed an ICDS marker to evaluate the prognosis and drug response of glioma patients, and confirmed that SERPINH1 promotes the malignant phenotype of gliomas by modulating the JAK/STAT signaling pathway.

Indexed as

Brain NeoplasmsGliomaImmunogenic Cell DeathMachine LearningPrecision MedicineBiomarkers, TumorCell Line, TumorCell MovementCell ProliferationFemaleGene Expression Regulation, NeoplasticHumansMaleMiddle AgedPrognosisBiomarkers, TumorGliomaImmunogenic cell deathJAK/STAT pathwayPrognostic modelSERPINH1

Identifiers

PMID40830197
PMCPMC12365229

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.