Evidence map›Paper›PMID 40833781›Full record

ArticleGenomics, proteomics & bioinformatics2025

Genome-wide Genetic Mutations Accumulated in Pigs Genome-edited for Xenotransplantation and Their Filial Generation.

Xueyun Huo 霍学云, Xianhui Sun 孙先辉, Xiangyang Xing 邢向阳, Jing Lu 路静, Jingjing Zhang 张晶晶, Yanyan Jiang 蒋艳艳, Xiao Zhu 朱筱, Changlong Li 李长龙, Jianyi Lv 吕建祎, Meng Guo 郭萌 and 7 more

Abstract read
In one paragraph

Article in Genomics, proteomics & bioinformatics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Xueyun Huo 霍学云School of Basic Medical Sciences, Capital Medical University, Beijing 100069, China.ORCID 0000-0002-1646-0963
Xianhui Sun 孙先辉Key Laboratory of Epigenetic Regulation and Intervention, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0009-0009-1408-566X
Xiangyang Xing 邢向阳Chengdu ClonOrgan Biotechnology Co., Ltd., Chengdu 610041, China.ORCID 0000-0001-7275-9401
Jing Lu 路静School of Basic Medical Sciences, Capital Medical University, Beijing 100069, China.ORCID 0009-0004-6370-2445
Jingjing Zhang 张晶晶Key Laboratory of Epigenetic Regulation and Intervention, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0009-0008-8916-551X
Yanyan Jiang 蒋艳艳Chengdu ClonOrgan Biotechnology Co., Ltd., Chengdu 610041, China.ORCID 0009-0005-0619-0014
Xiao Zhu 朱筱School of Basic Medical Sciences, Capital Medical University, Beijing 100069, China.ORCID 0009-0009-1416-849X
Changlong Li 李长龙School of Basic Medical Sciences, Capital Medical University, Beijing 100069, China.ORCID 0000-0001-6832-785X
Jianyi Lv 吕建祎School of Basic Medical Sciences, Capital Medical University, Beijing 100069, China.ORCID 0000-0002-5288-5328
Meng Guo 郭萌School of Basic Medical Sciences, Capital Medical University, Beijing 100069, China.ORCID 0000-0002-1482-1446
Lixue Cao 曹立雪School of Basic Medical Sciences, Capital Medical University, Beijing 100069, China.ORCID 0000-0001-7640-2872
Xin Liu 刘欣School of Basic Medical Sciences, Capital Medical University, Beijing 100069, China.ORCID 0000-0003-1337-6122
Zhenwen Chen 陈振文School of Basic Medical Sciences, Capital Medical University, Beijing 100069, China.ORCID 0000-0003-4678-3437
Dengke Pan 潘登科Chengdu ClonOrgan Biotechnology Co., Ltd., Chengdu 610041, China.ORCID 0000-0002-7994-1465
Shunmin He 何顺民Key Laboratory of Epigenetic Regulation and Intervention, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0000-0002-7294-0865
Chen Zhang 张晨School of Basic Medical Sciences, Capital Medical University, Beijing 100069, China.ORCID 0000-0002-7940-8054
Xiaoyan Du 杜小燕School of Basic Medical Sciences, Capital Medical University, Beijing 100069, China.ORCID 0000-0002-4030-7299

Funding

Major Projects of the National Natural Science Foundation of China 32090054National Key R&D Program for Young Scientists of China 2021YFF0703200National Natural Science Foundation of China 31970512
6 · The paper itself

Abstract

Although xenotransplantation has been revolutionized by the development of genome-edited pigs, it is still unknown whether these pigs and their offspring remain genomically stable. Here, we showed that GGTA1-knockout (GTKO) pigs accumulated an average of 1205 genome-wide genetic mutations, and their filial 1 (F1) offspring contained an average of 18 de novo mutations compared with wild-type controls and their parents. The majority of mutations were in regions annotated as intergenic without altering protein functions, and none were located at predicted off-target sites. RNA sequencing analysis and phenotypic observations indicated that the accumulated mutations may have only a limited influence on GTKO pigs, and most of the mutations in the GTKO pigs could be attributed to the electrotransfection of plasmids into cells. This is the first report demonstrating that genetic mutations in genome-edited pigs are inherited stably by the next generation, providing a reference for the safe application and a standard approach to breed genome-edited pigs for xenotransplantation.

Indexed as

Gene EditingGenomeMutationTransplantation, HeterologousAnimalsAnimals, Genetically ModifiedGalactosyltransferasesGene Knockout TechniquesSwinealpha-1,3-galactosyltransferase 1, porcineGalactosyltransferasesCRISPR/Cas9Genetic mutationPigWGSXenotransplantation

Identifiers

PMID40833781
PMCPMC12771377

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.