Evidence map›Paper›PMID 40833966›Full record

ArticlePloS one2025

Genome-Wide identification and salt stress-responsive expression dynamics of the HMGR gene family in Ziziphus jujuba var. spinosa.

Xiaohan Tang, Xiaojun Ma, Jun Cao, Xinhong Wang, Xuexiang Li, Xiaozhou Yang, Jing Shu

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xiaohan TangCollege of Forestry Engineering, Shandong Agriculture and Engineering University, Jinan, P R China.ORCID https://orcid.org/0009-0000-7921-6485
Xiaojun MaCollege of Forestry Engineering, Shandong Agriculture and Engineering University, Jinan, P R China.
Jun CaoCollege of Forestry Engineering, Shandong Agriculture and Engineering University, Jinan, P R China.
Xinhong WangCollege of Forestry Engineering, Shandong Agriculture and Engineering University, Jinan, P R China.
Xuexiang LiCollege of Forestry Engineering, Shandong Agriculture and Engineering University, Jinan, P R China.
Xiaozhou YangCollege of Forestry Engineering, Shandong Agriculture and Engineering University, Jinan, P R China.
Jing ShuCollege of Forestry Engineering, Shandong Agriculture and Engineering University, Jinan, P R China.ORCID https://orcid.org/0000-0001-7811-4313

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Terpenoids are critical components of plant environmental adaptation mechanisms. They also exhibit significant therapeutic potential in herbal medicine. 3-Hydroxy-3-methylglutaryl coenzyme A reductase (HMGR), a pivotal rate-limiting enzyme governing the initial stage of the mevalonate (MVA) pathway in triterpene saponin biosynthesis, remains uncharacterized in Ziziphus jujuba var. spinosa. Through genome-wide and molecular analysis, we systematically identified ZjHMGR isoforms and revealed differential tissue-specific expression patterns and significant salt stress-responsive regulation across identified isoforms. Our findings reveal three evolutionarily conserved ZjHMGR isoforms with a complete HMG-CoA reductase domain and closely related to Populus trichocarpa. Collinearity analysis revealed two collinear gene pairs, and purifying selection was identified as the primary evolutionary force acting on the ZjHMGR gene family. Cis-acting element analysis revealed that ZjHMGR gene family enriched MYB-related, TC-rich repeats, light- and hormone-responsive elements, suggesting transcriptional regulation by environmental stimuli and phytohormones. Spatiotemporal expression analysis via qRT-PCR revealed differential transcriptional patterns of ZjHMGR members, with pronounced upregulation under ABA, MeJA, and light induction. Saline stress disrupted the growth of wild jujube seedlings while activating ZjHMGR expression alongside other MVA pathway genes. Overexpression of ZjHMGR enhances salt stress resistance in Arabidopsis thaliana. This study lays the foundation for further investigations into the molecular mechanisms of the ZjHMGR gene family concerning saponin biosynthesis, phytohormone interactions, and salt tolerance in wild jujube.

Indexed as

Gene Expression Regulation, PlantPlant ProteinsSalt StressZiziphusGenome, PlantMultigene FamilyPhylogenySalt TolerancePlant Proteins

Identifiers

PMID40833966
PMCPMC12367118

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.