Evidence map›Paper›PMID 40847295›Full record

ArticleBMC cancer2025

Regulation of EMT-MET and chemoresistance by the Lc3Cer-synthase B3GNT5.

Laura E Clark, Katherine Hylton Rorie, Amanda J G Dickinson, Santiago Lima

Abstract read
In one paragraph

Article in BMC cancer, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Laura E Clark *Department of Biology, Virginia Commonwealth University, Richmond, VA, 23284, USA.
Katherine Hylton Rorie *Department of Biology, Virginia Commonwealth University, Richmond, VA, 23284, USA.
Amanda J G DickinsonDepartment of Biology, Virginia Commonwealth University, Richmond, VA, 23284, USA.
Santiago LimaDepartment of Biology, Virginia Commonwealth University, Richmond, VA, 23284, USA. slima@vcu.edu.

Funding

Glycosphingolipid Alterations in Lung CancerR21CA232234 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI LIMA, SANTIAGO · 2019 to 2020
$371k
Cayman Biomedical Research Institute CABRI AwardNCI NIH HHS R21 CA232234NIH HHS R21CA232234
6 · The paper itself

Abstract

backgroundGlycosphingolipids (GSL) are essential components of the plasma membrane where they are known to play key structural and functional roles and are known to influence molecular processes involved in cancer malignancy, including multi-drug chemoresistance, the epithelial to mesenchymal transition (EMT), and the activation or receptor tyrosine kinases (RTK). Thus, investigating and understanding how GSLs are regulated in cancer and the impact they have on malignancy have important therapeutic potential. In the GSL biosynthetic pathway, one critical regulator of two of the four major branches of GSLs is the gene product of B3GNT5, which produces the precursor for all GSLs in the lactoside and neolactoside series.

methodsPublicly available data was mined to determine the types and prevalence of genetic lesions at the B3GNT5 locus in various cancers, and to assess the impact of increased expression on patient outcomes. HeLa cells in which B3GNT5 was partially depleted using CRISPR-Cas9 approaches were used to determine how its expression levels impacted several phenotypic properties associated with cancer malignancy. Mass spectrometry was used to assess the effect of B3GNT5 on the levels of the Lc3Cer precursors glucosylceramide (GlcCer) and lactosylceramide (LacCer).

resultsB3GNT5 copy number gain and overexpression are widespread across human cancers and are significantly associated with poor prognosis. Partial depletion of B3GNT5 in HeLa cells led to accumulation of GlcCer and LacCer, increased chemoresistance, altered EMT marker expression, and decreased activation of multiple RTKs following stimulation with serum-suggesting broad signaling and phenotypic shifts.

conclusionsB3GNT5 is frequently altered in human cancers and correlates with adverse clinical outcomes. Functional depletion reveals its key role in regulating glycosphingolipid metabolism, signaling, and malignant phenotypes. These findings support B3GNT5 as an important target for therapeutic intervention in cancer.

Indexed as

Drug Resistance, NeoplasmEpithelial-Mesenchymal TransitionN-AcetylglucosaminyltransferasesNeoplasmsProto-Oncogene Proteins c-metGene Expression Regulation, NeoplasticGlycosphingolipidsHeLa CellsHumansGlycosphingolipidsMET protein, humanN-AcetylglucosaminyltransferasesProto-Oncogene Proteins c-metB3GNT5CancerChemoresistanceEMTGlucosylceramideGlycosphingolipidLactosylceramide

Identifiers

PMID40847295
PMCPMC12372232

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.