Evidence map›Paper›PMID 40858537›Full record

ArticleNature communications2025

Optogenetic actin network assembly on lipid bilayer uncovers the network density-dependent functions of actin-binding proteins.

Kei Yamamoto, Makito Miyazaki

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Let There be Light! Light as an Engine and Regulator in Synthetic Cells.Angewandte Chemie (International ed. in English) · 2026
    Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Kei YamamotoRIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa, Japan. kei.yamamoto.jv@riken.jp.ORCID http://orcid.org/0000-0003-2712-1550
Makito MiyazakiRIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa, Japan. makito.miyazaki@riken.jp.ORCID http://orcid.org/0000-0002-4603-851X

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) 21K19220MEXT | Japan Society for the Promotion of Science (JSPS) 22H05171MEXT | Japan Society for the Promotion of Science (JSPS) 22J00094MEXT | Japan Society for the Promotion of Science (JSPS) 23K14179MEXT | JST | Precursory Research for Embryonic Science and Technology (PRESTO) JPMJPR20ED
6 · The paper itself

Abstract

The actin cytoskeleton forms a meshwork that drives cellular deformation. Network properties, determined by density and actin-binding proteins, are crucial, yet how density governs protein penetration and dynamics remains unclear. Here, we report an in vitro optogenetic system, named OptoVCA, enabling Arp2/3 complex-mediated actin assembly on lipid membranes. By tuning illumination power, duration, and pattern, OptoVCA flexibly manipulates the density, thickness, and shape of the actin network. Taking these advantages, we examine how network density affects two actin-binding proteins: myosin and ADF/cofilin. We find that even modest increases in density strictly inhibit myosin filament penetration by steric hindrance. Penetrated myosin filaments generate directional actin flow in networks with density gradients. In contrast, ADF/cofilin accesses networks regardless of density, yet network disassembly is markedly reduced by increased density. Thus, OptoVCA reveals that network density differentially regulates actin-binding protein penetration and activity. These findings advance understanding of cell mechanics through precise, light-based manipulation of cytoskeletal structure.

Indexed as

Actin CytoskeletonActinsLipid BilayersOptogeneticsActin Depolymerizing FactorsAnimalsDogsMadin Darby Canine Kidney CellsMyosinsActin Depolymerizing FactorsActinsLipid BilayersMyosins

Identifiers

PMID40858537
PMCPMC12381033

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.