Evidence mapPaperPMID 40864349Full record

ArticleBiochemical genetics2026

Genetic Variants and Alteration in Transcription Factor 7-Like 2 (TCF7L2) mRNA Level in Ischemic Stroke Patients Among Bengali and Gujarati Population from India.

Dipanwita Sadhukhan, Arunima Roy, Sukla Nath, Esha Basu, Joydeep Mukherjee, Kartik Chandra Ghosh, Tapas Kumar Banerjee, Prasad Krishnan, Sourya Kishore Chatterjee, Soaham Desai and 5 more

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Article in Biochemical genetics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

15 authors.

Dipanwita SadhukhanMolecular Biology & Clinical Neuroscience Division, National Neurosciences Centre, Peerless Hospital, (2nd floor), 360, Panchasayar, Kolkata, 700094, India. Dipanwita.Sadhukhan@gmail.com.
Arunima RoyMolecular Biology & Clinical Neuroscience Division, National Neurosciences Centre, Peerless Hospital, (2nd floor), 360, Panchasayar, Kolkata, 700094, India.
Sukla NathDepartment of Biochemistry, Nilratan Sircar Medical College, Kolkata, India.
Esha BasuMolecular Biology & Clinical Neuroscience Division, National Neurosciences Centre, Peerless Hospital, (2nd floor), 360, Panchasayar, Kolkata, 700094, India.
Joydeep MukherjeeDepartment of Neurology, Nilratan Sircar Medical College, Kolkcata, India.
Kartik Chandra GhoshDepartment of Neurology, Nilratan Sircar Medical College, Kolkcata, India.
Tapas Kumar BanerjeeDepartment of Neurology, National Neurosciences Centre, Kolkata, India.
Prasad KrishnanDepartment of Neurology, National Neurosciences Centre, Kolkata, India.
Sourya Kishore ChatterjeeDepartment of Neurology, National Neurosciences Centre, Kolkata, India.
Soaham DesaiDept of Neurology, Shree Krishna Hospital and Pramukhswami Medical College, Bhaikaka University, Anand, Karamsad, Gujarat, India.
Vishal Ajitbhai PatelDept of Neurology, Shree Krishna Hospital and Pramukhswami Medical College, Bhaikaka University, Anand, Karamsad, Gujarat, India.
Debes RayDepartment of Biochemistry, Nilratan Sircar Medical College, Kolkata, India.
Subhra Prakash HuiS. N. Pradhan Centre for Neurosciences, University of Calcutta, Kolkata, India.
Soma GuptaDepartment of Biochemistry, Nilratan Sircar Medical College, Kolkata, India.
Arindam BiswasMolecular Biology & Clinical Neuroscience Division, National Neurosciences Centre, Peerless Hospital, (2nd floor), 360, Panchasayar, Kolkata, 700094, India. thisisarindam@gmail.com.

Funding

Department of Biotechnology, Ministry of Science and Technology, India BT/NIDAN/01/05/2018Department of Science & Technology and Biotechnology, Govt. of West Bengal STBT-11012(19)/15/2024-ST SECDepartment of Science & Technology, Govt. of India DST-WISE-PDF/LS-1/2024
6 · The paper itself

Abstract

Diabetes and Hyperlipidemia are major risk factors for stroke across the world population. TCF7L2, a key regulator of the WNT signaling pathway shows genetic association with these metabolic disorders in ethnicity dependant manner. However, its role in stroke pathogenesis (if any) is not well characterized. Here, we aim to (a) investigate and correlate dysregulation of TCF7L2 expression with diabetes or hyperlipidemia-associated Ischemic Stroke (b) identify genetic risk variants in the TCF7L2 gene, and (c) establish correlations between TCF7L2 mRNA levels and biochemical parameters. Based on radiological findings for Ischemic Stroke, a total of 50 unrelated subjects were recruited with diverse biochemical parameters for TCF7L2 mRNA expression study in PBMC, followed by correlation with fasting blood sugar and lipid profile. Furthermore, mutation screening (31 Cases and 30 Controls) and genetic association studies (rs7901695 & rs7903146) were performed among 326 cases and 258 controls from two different ethnic population of India. In our study, a significant downregulation of TCF7L2 transcript was observed between stroke cases and controls as major finding. Furthermore, stratification of stroke cases, according to their blood lipid and glucose level revealed a lower quantity of TCF7L2 transcript in hyperlipidemia stroke cases than non-hyperlipidemia subjects. However, no such association against diabetic status was observed. A simultaneous finding showing negative correlation of gene expression with total blood cholesterol level (P = 0.0187; r = - 0.4012) but not for diabetes, thus suggests TCF7L2 mediated altered lipid metabolism as a risk for stroke pathogenesis. On the other hand, allelic (P = 0.0207) and genotypic (P = 0.0002) association of functional variants like rs7901695 variants [P = 0.0207] among the majorly Bengali population of Kolkata and rs7903146 [P = 0.0164] among the Gujarati cohort was observed, respectively. Thus, on basis of our findings, genotyping of TCF7L2 variants or quantification of transcript, consumption of low-fat diet may be recommended to hyperlipidemia individuals for risk prediction and preventive treatment regimen, respectively.

Indexed as

Ischemic StrokePolymorphism, Single NucleotideRNA, MessengerStrokeTranscription Factor 7-Like 2 ProteinAdultAgedCase-Control StudiesFemaleGenetic Predisposition to DiseaseHumansHyperlipidemiasIndiaMaleMiddle AgedRNA, MessengerTCF7L2 protein, humanTranscription Factor 7-Like 2 ProteinGenetic VariantsHyperglycemiaHyperlipidemiaIndiansIschemic StrokeTCF7L2Transcript analysis

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.