Evidence map›Paper›PMID 40873584›Full record

ArticleFrontiers in immunology2025

Machine learning identifies PYGM as a macrophage polarization-linked metabolic biomarker in rectal cancer prognosis.

Chengyuan Xu, Siqi Zhang, Bin Sun, Zicheng Yu, Hailong Liu

Abstract read
In one paragraph

Article in Frontiers in immunology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Chengyuan Xu *Department of General, Yangpu Hospital, School of Medicine, Tongji University, Shanghai, China.
Siqi Zhang *Department of Pharmacy, Yangpu Hospital, School of Medicine, Tongji University, Shanghai, China.
Bin Sun *Center for Clinical Research and Translational Medicine, Yangpu Hospital, School of Medicine, Tongji University, Shanghai, China.
Zicheng Yu *Department of Pharmacy, Yangpu Hospital, School of Medicine, Tongji University, Shanghai, China.
Hailong Liu *Department of General, Yangpu Hospital, School of Medicine, Tongji University, Shanghai, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Macrophage polarization plays a pivotal role in shaping the tumor microenvironment and influencing rectal cancer progression. However, the metabolic and prognostic regulators governing this process remain largely undefined. Methods: We constructed a macrophage polarization gene signature (MPGS) by integrating weighted gene co-expression network analysis (WGCNA) with multiple machine learning algorithms across two independent cohorts: 363 rectal cancer samples from GSE87211 and 177 samples from The Cancer Genome Atlas (TCGA). The prognostic performance of MPGS was evaluated across rectal and multiple other cancer types. Functional analyses, single-cell RNA sequencing, immunohistochemistry of clinical specimens, and Results: The MPGS exhibited robust prognostic capability and effectively predicted responses to immunotherapy and various chemotherapeutic agents. Both MPGS and its central metabolic component, Conclusions: This study firstly highlights

Indexed as

Biomarkers, TumorMachine LearningMacrophage ActivationMacrophagesRectal NeoplasmsCell Line, TumorFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansPrognosisTumor-Associated MacrophagesTumor MicroenvironmentBiomarkers, Tumormachine learningmacrophage polarizationmetabolismprognosisPYGMrectal cancer

Identifiers

PMID40873584
PMCPMC12378483

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.