Evidence map›Paper›PMID 40874077›Full record

ArticleIEEE access : practical innovations, open solutions2025

Octascope: A Lightweight Pre-Trained Model for Optical Coherence Tomography.

Haoyang Cui, Chen Wang, Paul Calle, Yunlong Liu, Qinghao Zhang, Sinaro Ly, Justin Reynolds, Feng Yan, K E Zhang, Ronghao Liu and 6 more

Abstract read
In one paragraph

Article in IEEE access : practical innovations, open solutions, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Haoyang CuiSchool of Computer Science, Gallogly College of Engineering, The University of Oklahoma, Norman, OK 73019, USA.ORCID 0009-0009-8708-5556
Chen WangStephenson School of Biomedical Engineering, The University of Oklahoma, Norman, OK 73019, USA.ORCID 0000-0003-4645-3227
Paul CalleSchool of Computer Science, Gallogly College of Engineering, The University of Oklahoma, Norman, OK 73019, USA.ORCID 0009-0000-1849-4481
Yunlong LiuSchool of Computer Science, Gallogly College of Engineering, The University of Oklahoma, Norman, OK 73019, USA.
Qinghao ZhangStephenson School of Biomedical Engineering, The University of Oklahoma, Norman, OK 73019, USA.
Sinaro LySchool of Computer Science, Gallogly College of Engineering, The University of Oklahoma, Norman, OK 73019, USA.ORCID 0009-0002-5269-9717
Justin ReynoldsSchool of Computer Science, Gallogly College of Engineering, The University of Oklahoma, Norman, OK 73019, USA.
Feng YanStephenson School of Biomedical Engineering, The University of Oklahoma, Norman, OK 73019, USA.ORCID 0000-0001-9926-7554
K E ZhangStephenson School of Biomedical Engineering, The University of Oklahoma, Norman, OK 73019, USA.ORCID 0000-0003-3194-2546
Ronghao LiuStephenson School of Biomedical Engineering, The University of Oklahoma, Norman, OK 73019, USA.
Junyuan LiuStephenson School of Biomedical Engineering, The University of Oklahoma, Norman, OK 73019, USA.
Kar-Ming FungDepartment of Pathology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
Zhongxin YuDepartment of Pathology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
Ajay JainStephenson Cancer Center, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
Qinggong TangStephenson School of Biomedical Engineering, The University of Oklahoma, Norman, OK 73019, USA.ORCID 0000-0001-9499-5384
Chongle PanSchool of Computer Science, Gallogly College of Engineering, The University of Oklahoma, Norman, OK 73019, USA.ORCID 0000-0003-2860-0334

Funding

Tissue Pathology Shared ResourceP30CA225520 · NCI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI ROBERT S. MANNEL · 2018 to 2026
$27.1M
TUMOR RESISTANCE MECHANISMS TO ANTI-VEGF THERAPY IN PROSTATE CANCER (Sukyung Woo)P20GM103639 · NIGMS · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI DHANASEKARAN, DANNY N. · 2012 to 2022
$21.3M
Use of 3D Quantitative Optical Methods to Optimize Mebendazole Treatment of Ovarian CancerP20GM135009 · NIGMS · UNIVERSITY OF OKLAHOMA · PI Javier Antonio Jo · 2022 to 2026
$13.6M
Mentoring Translational Cancer Research in OklahomaP30GM154635 · NIGMS · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI Muralidharan Jayaraman · 2024 to 2026
$4.3M
Automatic Wide-Field Optical Coherence Tomography for Assessment of Transplant Kidney ViabilityR01DK133717 · NIDDK · UNIVERSITY OF MASSACHUSETTS AMHERST · PI POTTER, STEVEN, TANG, QINGGONG · 2022 to 2025
$2.5M
NCI NIH HHS P30 CA225520NIDDK NIH HHS R01 DK133717NIGMS NIH HHS P20 GM103639NIGMS NIH HHS P20 GM135009NIGMS NIH HHS P30 GM154635
6 · The paper itself

Abstract

Optical coherence tomography (OCT) imaging enables high resolution visualization of sub-surface tissue microstructures. However, OCT image analysis using deep learning is hampered by limited diverse training data to meet performance requirements and high inference latency for real-time applications. To address these challenges, we developed Octascope, a lightweight domain-specific convolutional neural network (CNN) - based model designed for OCT image analysis. Octascope was pre-trained using a curriculum learning approach, which involves sequential training, first on natural images (ImageNet), then on OCT images from retinal, abdominal, and renal tissues, to progressively acquire transferable knowledge. This multi-domain pre-training enables Octascope to generalize across varied tissue types. In two downstream tasks, Octascope demonstrated notable improvements in predictive accuracy compared to alternative approaches. In the epidural tissue detection task, our method surpassed single-task learning with fine-tuning by 9.13% and OCT-specific transfer learning by 5.95% in accuracy. Octascope outperformed VGG16 and ResNet50 by 5.36% and 6.66% in a retinal diagnosis task, respectively. In comparison to a Transformer-based OCT foundation model - RETFound, Octascope delivered 2 to 4.4 times faster inference speed with slightly better predictive accuracies in both downstream tasks. Octascope represented a significant advancement for OCT image analysis by providing an effective balance between computational efficiency and diagnostic accuracy for real-time clinical applications.

Indexed as

Deep learningdomain-specificfoundation modellightweightOctascopeOCT medical imagingtransfer learning

Identifiers

PMID40874077
PMCPMC12378998

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.