Evidence map›Paper›PMID 40877523›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

In Vivo Fermentation Production of RNA Interference Agents.

Neelu Batra, Mei-Juan Tu, Ai-Ming Yu

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Neelu BatraDepartment of Biochemistry and Molecular Medicine, UC Davis School of Medicine, Sacramento, CA, USA.
Mei-Juan TuDepartment of Biochemistry and Molecular Medicine, UC Davis School of Medicine, Sacramento, CA, USA.
Ai-Ming YuDepartment of Biochemistry and Molecular Medicine, UC Davis School of Medicine, Sacramento, CA, USA. aimyu@ucdavis.edu.

Funding

Staff InvestigatorsP30CA093373 · NCI · UNIVERSITY OF CALIFORNIA DAVIS · PI KC KENT LLOYD · 2002 to 2026
$84.9M
Novel bioengineered microRNA therapeutics for lung cancerR01CA225958 · NCI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Aiming Yu · 2019 to 2026
$3.7M
Novel biologic RNA molecules to modulate HCC metabolismR01CA291771 · NCI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Aiming Yu · 2024 to 2026
$2.4M
Supplement: Recombinant microRNAs in xenobiotic metabolism and dispositionR35GM140835 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI YU, AIMING · 2021 to 2025
$2.0M
Recombinant microRNAs in xenobiotic and nutrient dispositionR01CA253230 · NCI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Meijuan Tu · 2021 to 2026
$1.7M
NCI NIH HHS P30 CA093373NCI NIH HHS R01 CA225958NCI NIH HHS R01 CA253230NCI NIH HHS R01 CA291771NIGMS NIH HHS R35 GM140835
6 · The paper itself

Abstract

Novel in vivo approaches for manufacturing RNA agents are warranted to complement conventional methods such as in vitro transcription and chemical synthesis. Recently, we have identified and utilized unique tRNA-fused pre-miRNA carriers to establish a robust RNA molecular bioengineering technology that allows one to consistently and efficiently produce target, bioengineered or biologic RNA molecules bearing small interfering RNA (siRNA) payloads (BioRNA/siRNA). Here, we describe a streamlined method with a detailed protocol for the rational design, molecular cloning, heterologous overexpression, and chromatography purification of large quantity (multi-milligrams from 0.25 L of bacterial culture) and high quality (> 98% homogeneity and <5 endotoxin unit/μg RNA) of target BioRNA/siRNA molecules that are ready for basic research as well as experimental therapy.

Indexed as

BioengineeringFermentationRNA InterferenceRNA, Small InterferingCloning, MolecularGenetic VectorsHEK293 CellsHeLa CellsHumansPlasmidsRNA, MessengerTranscription, GeneticRNA, MessengerRNA, Small InterferingBioengineeredBioengineeringNoncoding RNAOverexpressionPre-miRNAPurificationRNA interference (RNAi)Small interfering RNA (siRNA)Synthetic biology

Identifiers

PMID40877523
PMCPMC12888826

What Socratic holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.