ReviewJournal of animal science2025
A primer on sequencing and genotype imputation in cattle.
Review in Journal of animal science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
2 citing papers in PubMed.
- Beef Improvement Federation Genetic Prediction Workshop: opportunities and obstacles to enhancing beef cattle evaluation with sequence data.Journal of animal science · 2025Article
- A vision of how low-coverage sequence data should contribute to genetic evaluation in the future.Journal of animal science · 2025Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
1 author.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Since their introduction to the beef industry, genotyping technologies have opened the door for genomic selection and accelerated population improvement. Single-nucleotide polymorphism arrays have served as the backbone of genomic selection programs since their introduction. Developments in sequencing and genotype imputation offer alternatives to array-based genotyping that have the potential to provide orders of magnitude more information at a lower cost. In this review, I give an overview of array-based genotyping, genomic sequencing, low-pass sequencing, and imputation. Additionally, I provide perspectives on how low-coverage sequencing and imputation could simultaneously drive genomic discovery and be used for routine genotyping as sequencing costs continue to decline.
Indexed as
Identifiers
What Socratic holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.