Evidence map›Paper›PMID 40904684›Full record

ArticleFrontiers in microbiology2025

Identification of the malonylation modification in

Xiaoyan Yu, Yi Li, Tingting Yang, Wenjie Li, Xiaozhu Dong, Aixiang Huang, Yanan Shi

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xiaoyan Yu *College of Food Science and Technology, Yunnan Agricultural University, Kunming, China.
Yi Li *College of Food Science and Technology, Yunnan Agricultural University, Kunming, China.
Tingting YangCollege of Food Science and Technology, Yunnan Agricultural University, Kunming, China.
Wenjie LiCollege of Food Science and Technology, Yunnan Agricultural University, Kunming, China.
Xiaozhu DongCollege of Food Science and Technology, Yunnan Agricultural University, Kunming, China.
Aixiang HuangCollege of Food Science and Technology, Yunnan Agricultural University, Kunming, China.
Yanan ShiYunnan College of Modern Coffee Industry, Yunnan Agricultural University, Kunming, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Post-translational modifications (PTMs) are critical regulators of bacterial biofilm formation, but the role of lysine malonylation (Kmal) in biofilm formation is still poorly understood. Methods: In this study, we analyzed the dynamic changes of protein malonylation of Results: Quantitative profiling identified 2,833 malonylated sites across 788 proteins, with significant enrichment in biofilm-associated proteins. Twelve conserved motifs, including Kmal******R and Kmal****R (* represents any amino acid residue), dominated the malonyl proteome landscape in Conclusion: This study provides a new perspective for understanding the general rules of bacterial biofilm formation and developing broad-spectrum anti-biofilm drugs.

Indexed as

AgrA proteinbiofilm formationlysine malonylationquorum-sensing systemStaphylococcus aureus

Identifiers

PMID40904684
PMCPMC12404037

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.