Evidence mapPaperPMID 40905839Full record

Observational studyInternational journal of surgery (London, England)2026

Epigenome-wide DNA methylation profiling in aneurysmal subarachnoid hemorrhage and delayed ischemic neurologic deficit: a prospective observational study.

Tomasz Klepinowski, Patrycja Przybyłowicz, Olga Taryma-Leśniak, Jan Bińkowski, Dagmara Lisman, Andrzej Ossowski, Konrad Jarosz, Marcin Sawicki, Wojciech Poncyljusz, Dominik Taterra and 3 more

Registry-linked trialAbstract readObservational Study
In one paragraph

Observational study in International journal of surgery (London, England), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT06881329 (Epigenome-wide DNA Methylation Profiling in Aneurysmal Subarachnoid Hemorrhage and Delayed Ischemic Neurologic Deficit), which is not on this map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT06881329 active not recruitingnot on this map

Epigenome-wide DNA Methylation Profiling in Aneurysmal Subarachnoid Hemorrhage and Delayed Ischemic Neurologic Deficit

TypeobservationalSponsorPomeranian Medical University SzczecinRan2021 to 2025Enrolled61ConditionsSubarachnoid Hemorrhage, Aneurysmal, Delayed Cerebral Ischemia, Cerebral Vasospasm After Subarachnoid Hemorrhage, Intracranial Aneurysm
3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Tomasz KlepinowskiDepartment of Neurosurgery, Pomeranian Medical University Hospital No. 1, Szczecin, Poland.ORCID 0000-0003-4806-2094
Patrycja PrzybyłowiczIndependent Clinical Epigenetics Laboratory, Pomeranian Medical University in Szczecin, Szczecin, Poland.
Olga Taryma-LeśniakIndependent Clinical Epigenetics Laboratory, Pomeranian Medical University in Szczecin, Szczecin, Poland.
Jan BińkowskiIndependent Clinical Epigenetics Laboratory, Pomeranian Medical University in Szczecin, Szczecin, Poland.
Dagmara LismanDepartment of Forensic Genomics and Genetics, Pomeranian Medical University in Szczecin, Szczecin, Poland.ORCID 0000-0003-2876-5665
Andrzej OssowskiDepartment of Forensic Genomics and Genetics, Pomeranian Medical University in Szczecin, Szczecin, Poland.ORCID 0000-0002-6819-1638
Konrad JaroszDepartment of Anesthesiology and Intensive Care, Pomeranian Medical University Hospital, Szczecin, Poland.ORCID 0000-0001-5444-5150
Marcin SawickiDepartment of Diagnostic Imaging and Interventional Radiology, Pomeranian Medical University Hospital, Szczecin, Poland.ORCID 0000-0003-0129-2343
Wojciech PoncyljuszDepartment of Diagnostic Imaging and Interventional Radiology, Pomeranian Medical University Hospital, Szczecin, Poland.ORCID 0000-0002-5173-5635
Dominik TaterraDepartment of Orthopedics and Rehabilitation, Jagiellonian University Medical College, Zakopane, Poland.ORCID 0000-0001-5135-6750
Kajetan ŁątkaDepartment of Neurology, St Hedwig's Regional Specialist Hospital, Institute of Medical Sciences, University of Opole, Poland.
Tomasz K WojdaczIndependent Clinical Epigenetics Laboratory, Pomeranian Medical University in Szczecin, Szczecin, Poland.ORCID 0000-0001-6003-2432
Leszek SaganDepartment of Neurosurgery, Pomeranian Medical University Hospital No. 1, Szczecin, Poland.ORCID 0000-0001-5366-1070

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe molecular mechanisms underlying aneurysmal subarachnoid hemorrhage (aSAH) and delayed ischemic neurologic deficit (DIND) remain poorly understood. We hereby present the study investigating epigenome-wide profile of DNA methylation in adults with aSAH and DIND.

methodsA prospective observational epigenome-wide association study (EWAS) was conducted with DNA extracted from the peripheral whole blood of subjects with aSAH. DNA methylation profiling was conducted using Infinium MethylationEPIC v2.0 BeadChip microarray with a total number of 814 206 probes. Healthy matched controls were obtained from the publicly available dataset (GSE246337, n = 500) with 1:1 matching. DIND was determined by a combination of clinical symptoms and radiographic vasospasm. Differentially methylated probes (DMPs) were identified using linear regression model with Benjamini-Hochberg correction. This study was registered with ClinicalTrials.gov (NCT06881329).

results122 participants were included: 61 prospectively recruited with aSAH and 61 external age-, sex-, race-, and ethnicity-matched controls. Among aSAH patients, 32 developed DIND (52%). Overall, with linear regression, we identified 2642 DMPs associated with aSAH after multiple testing correction, and the lack of significant DIND-associated methylation changes. Specifically, as the top hit, we detected significant hypomethylation of cg15004555 (Δβ = -0.254) in aSAH patients, annotated to exon 2 of AIM2 , a gene whose expression is critical for AIM2-driven inflammasome activation. The functional enrichment analysis revealed that genes associated with the identified methylation changes were enriched in ontology terms related to specific biological processes such as immune response, pain modulation, phosphorus metabolism, as well as cellular components including cis-Golgi network or beta-catenin complex.

conclusionsOur prospective observational EWAS identified significant DNA methylation changes in the blood cells and demonstrated a functional link to specific biological processes in aSAH. Further validation studies are necessary to confirm our findings.

Indexed as

DNA MethylationEpigenomeSubarachnoid HemorrhageAdultAgedCase-Control StudiesFemaleHumansMaleMiddle AgedProspective Studiesaneurysmal subarachnoid hemorrhagebiomarkerscerebral vasospasmdelayed ischemic neurologic deficitDNA methylationintracranial aneurysm

Identifiers

PMID40905839
PMCPMC12825660

What Socratic holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.