Evidence map›Paper›PMID 40937643›Full record

ArticleJournal of the Chinese Medical Association : JCMA2025

PM2.5 exposure induces transcriptomic changes in ARPE-19 cells with activation of TGFβ-mediated signaling pathways: A next-generation sequencing approach.

Chueh-Tan Chen, Zhi-Hu Lin, Tung-Yi Lin, Yi-An Lin, Hsin Yeh, Wei-Jyun Hua, Ching-Yao Tsai

Abstract read
In one paragraph

Article in Journal of the Chinese Medical Association : JCMA, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Chueh-Tan ChenDepartment of Health and Welfare, University of Taipei, Taipei, Taiwan, ROC.
Zhi-Hu LinDepartment of Ophthalmology, Taipei City Hospital, Taipei, Taiwan, ROC.
Tung-Yi LinInstitute of Traditional Medicine, National Yang Ming Chiao Tung University, Taipei, Taiwan, ROC.
Yi-An LinInstitute of Traditional Medicine, National Yang Ming Chiao Tung University, Taipei, Taiwan, ROC.
Hsin YehDepartment of Ophthalmology, Taipei City Hospital, Taipei, Taiwan, ROC.
Wei-Jyun HuaInstitute of Traditional Medicine, National Yang Ming Chiao Tung University, Taipei, Taiwan, ROC.
Ching-Yao TsaiDepartment of Health and Welfare, University of Taipei, Taipei, Taiwan, ROC.ORCID 0000-0003-1199-1121

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAmbient fine particulate matter (PM2.5) has emerged as a critical environmental threat to ocular health; however, the underlying molecular mechanisms affecting the retinal pigment epithelium (RPE) remain largely uncharacterized. This study aimed to investigate transcriptomic alterations in RPE cells following PM2.5 exposure and to identify key regulatory pathways involved.

methodsNext-generation sequencing (NGS) was used to investigate differential gene expression in ARPE-19 cells upon PM2.5 exposure. Bioinformatic analyses, including pathway enrichment and gene set enrichment analysis (GSEA), were performed to identify affected signaling cascades. Functional assays-including cell viability, wound healing, and Transwell migration-were conducted to evaluate phenotypic changes. Quantitative RT-PCR (Reverse Transcription Polymerase Chain Reaction) and ELISA (Enzyme-Linked Immunosorbent Assay) validated gene expression and transforming growth factor-beta (TGF-β) secretion. TGF-β stimulation and receptor inhibition were applied to dissect pathway involvement.

resultsComprehensive analysis revealed substantial changes in gene expression profiles, with pathway enrichment highlighting the activation of cell migration-related pathways such as focal adhesion, regulation of actin cytoskeleton, extracellular matrix (ECM)-receptor interaction, tight junction, and adherens junction. Notably, the TGF-β, MAPK (Mitogen-Activated Protein Kinase), and PI3K/AKT (Phosphoinositide 3-Kinase / Protein Kinase B) pathways were significantly modulated. Functional assays showed that PM2.5 exposure enhanced ARPE-19 cell viability and migratory capacity. Among the differentially expressed genes, angiopoietin-like 4 (ANGPTL4) was markedly upregulated following PM2.5 stimulation. Pharmacological inhibition of TGF-β signaling abrogated PM2.5-induced ANGPTL4 expression, suggesting a pivotal role of the TGF-β pathway in mediating these effects.

conclusionThese findings demonstrate that PM2.5 induces transcriptomic reprogramming and activates the TGF-β signaling cascade in RPE cells, thereby enhancing cellular migration. Specifically, ANGPTL4 was identified as a key downstream effector of this pathway. This study provides novel insights into the molecular mechanisms by which air pollution contributes to retinal disease pathogenesis and suggests potential therapeutic targets for preventing PM2.5-induced retinal injury.

Indexed as

High-Throughput Nucleotide SequencingParticulate MatterRetinal Pigment EpitheliumSignal TransductionTranscriptomeTransforming Growth Factor betaCell LineCell MovementHumansParticulate MatterTransforming Growth Factor betaANGPTL4PM2.5Retinal pigment epithelium cellTGF-β

Identifiers

PMID40937643
PMCPMC12718711

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.