Evidence map›Paper›PMID 40940796›Full record

SynthesisCells2025

Machine Learning for Multi-Omics Characterization of Blood Cancers: A Systematic Review.

Sultan Qalit Alhamrani, Graham Roy Ball, Ahmed A El-Sherif, Shaza Ahmed, Nahla O Mousa, Shahad Ali Alghorayed, Nader Atallah Alatawi, Albalawi Mohammed Ali, Fahad Abdullah Alqahtani, Refaat M Gabre

Abstract readSystematic Review
In one paragraph

Synthesis in Cells, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Sultan Qalit AlhamraniTabuk Poison Control and Forensic Medicinal Chemistry Center, Ministry of Health, Tabuk 47915, Saudi Arabia.
Graham Roy BallIntelligent Omics Ltd., Biocity, Pennyfoot Street, Nottingham NG1 1GF, UK.ORCID 0000-0001-5828-7129
Ahmed A El-SherifDepartment of Chemistry, Faculty of Science, Cairo University, Giza 12613, Egypt.
Shaza AhmedFaculty of Biotechnology, October University for Modern Sciences and Arts, Giza 12451, Egypt.ORCID 0000-0001-5258-0586
Nahla O MousaDepartment of Biotechnology, Faculty of Science, Cairo University, Giza 12613, Egypt.ORCID 0000-0001-5851-7369
Shahad Ali AlghorayedFaculty of Biotechnology, October University for Modern Sciences and Arts, Giza 12451, Egypt.
Nader Atallah AlatawiFaculty of Biotechnology, October University for Modern Sciences and Arts, Giza 12451, Egypt.
Albalawi Mohammed AliKing Fahad Specialist Hospital, Tabuk Ministry of Health, Tabuk 47717, Saudi Arabia.
Fahad Abdullah AlqahtaniKing Fahad Specialist Hospital, Tabuk Ministry of Health, Tabuk 47717, Saudi Arabia.
Refaat M GabreDepartment of Biotechnology, Faculty of Science, Cairo University, Giza 12613, Egypt.ORCID 0000-0002-7511-9204

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Artificial Intelligence and machine learning are increasingly used to interrogate complex biological data. This systematic review evaluates their application to multi-omics for the molecular characterization of hematological malignancies, an area with unmet clinical need. We searched PubMed, Embase, Institute of Electrical and Electronics Engineers Xplore, and Web of Science from January 2015 to December 2024. Two reviewers screened records, extracted data, and used a modified appraisal emphasizing explainability, performance, reproducibility, and ethics. From 2847 records, 89 studies met inclusion criteria. Studies focused on acute myeloid leukemia (34), acute lymphoblastic leukemia (23), and multiple myeloma (18). Other hematological diseases were less frequently studied. Methods included Support Vector Machines, Random Forests, and deep learning (28, 25, and 24 studies). Multi-omics integration was reported in 23 studies. External validation occurred in 31 studies, and explainability in 19. The median diagnostic area under the curve was 0.87 (interquartile range 0.81 to 0.94); deep learning reached 0.91 but offered the least explainability. Artificial Intelligence and machine learning show promise for molecular characterization, yet gaps in validation, interpretability, and standardization remain. Priorities include external validation, interpretable modeling, harmonized evaluation, and standardized reporting with shared benchmarks to enable safe, reproducible clinical translation.

Indexed as

GenomicsHematologic NeoplasmsMachine LearningHumansMultiomicsartificial intelligenceethicsexplainabilitygenomicshematological malignanciesmachine learningmolecular characterizationmulti-omics integrationPRISMAproteomicsreproducibilitysystematic reviewtranscriptomics

Identifiers

PMID40940796
PMCPMC12427946

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.