Evidence map›Paper›PMID 40941864›Full record

ReviewPlants (Basel, Switzerland)2025

Climate-Resilient Crops: Integrating AI, Multi-Omics, and Advanced Phenotyping to Address Global Agricultural and Societal Challenges.

Doni Thingujam, Sandeep Gouli, Sachin Promodh Cooray, Katie Busch Chandran, Seth Bradley Givens, Renganathan Vellaichamy Gandhimeyyan, Zhengzhi Tan, Yiqing Wang, Keerthi Patam, Sydney A Greer and 14 more

Abstract readReview
In one paragraph

Review in Plants (Basel, Switzerland), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 2 syntheses or guidelines pooled it.

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  6. Artificial intelligence-driven advancements in agricultural biotechnology.Journal, genetic engineering & biotechnology · 2026
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  16. Decoding the rhizosphere microbiome againstFrontiers in microbiomes · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Doni ThingujamDepartment of Biological Sciences, Clemson University, 132 Long Hall, Clemson, SC 29634, USA.
Sandeep GouliDepartment of Plant Pathology and Crop Physiology, Louisiana State University Agricultural Center, Baton Rouge, LA 70803, USA.
Sachin Promodh CoorayDepartment of Agricultural & Biological Engineering, Mississippi State University, Starkville, MS 39762, USA.
Katie Busch ChandranCenter for Community Outreach Development, University of Alabama at Birmingham, Birmingham, AL 35294, USA.ORCID 0009-0008-2714-4190
Seth Bradley GivensDepartment of Agricultural & Biological Engineering, Mississippi State University, Starkville, MS 39762, USA.
Renganathan Vellaichamy GandhimeyyanDepartment of Plant and Soil Sciences, Mississippi State University, Starkville, MS 39759, USA.
Zhengzhi TanDepartment of Genetics & Biochemistry, Clemson University, 105 Collings St., Biosystems Research Complex, Clemson, SC 29634, USA.
Yiqing WangDepartment of Genetics & Biochemistry, Clemson University, 105 Collings St., Biosystems Research Complex, Clemson, SC 29634, USA.
Keerthi PatamDepartment of Genetics & Biochemistry, Clemson University, 105 Collings St., Biosystems Research Complex, Clemson, SC 29634, USA.
Sydney A GreerDepartment of Genetics & Biochemistry, Clemson University, 105 Collings St., Biosystems Research Complex, Clemson, SC 29634, USA.ORCID 0009-0006-0073-9819
Ranju AcharyaDepartment of Agricultural Economics and Agribusiness, Louisiana State University Agricultural Center, Baton Rouge, LA 70803, USA.ORCID 0000-0002-1158-4924
David Octor MoseleyDean Lee Research and Extension Center, Louisiana State University Agricultural Center, Alexandria, LA 71302, USA.
Nesma OsmanDepartment of Agricultural Education, Leadership, and Communications, Mississippi State University, Starkville, MS 39762, USA.ORCID 0000-0003-1204-5591
Xin ZhangDepartment of Agricultural & Biological Engineering, Mississippi State University, Starkville, MS 39762, USA.ORCID 0000-0001-9654-3859
Megan E BrookerDepartment of Sociology, University of Alabama at Birmingham, Birmingham, AL 35233, USA.ORCID 0009-0009-5876-7988
Mary Love TagertDepartment of Agricultural & Biological Engineering, Mississippi State University, Starkville, MS 39762, USA.ORCID 0000-0002-0745-2099
Mark J SchaferDepartment of Agricultural Economics and Agribusiness, Louisiana State University Agricultural Center, Baton Rouge, LA 70803, USA.ORCID 0009-0008-3777-3361
Changyoon JeongRed River Research Station, Louisiana State University Agricultural Center, Bossier City, LA 71105, USA.ORCID 0000-0001-7181-6750
Kevin Flynn HoffsethDepartment of Biological and Agricultural Engineering, Louisiana State University Agricultural Center, Baton Rouge, LA 70803, USA.ORCID 0000-0002-0426-2871
Raju BheemanahalliDepartment of Plant and Soil Sciences, Mississippi State University, Starkville, MS 39759, USA.ORCID 0000-0002-9325-4901
J Michael WyssDepartment of Cell, Developmental, and Integrative Biology, University of Alabama at Birmingham, Birmingham, AL 35233, USA.ORCID 0000-0003-1094-2934
Nuwan Kumara WijewardaneDepartment of Agricultural & Biological Engineering, Mississippi State University, Starkville, MS 39762, USA.ORCID 0000-0001-8962-9451
Jong Hyun HamDepartment of Plant Pathology and Crop Physiology, Louisiana State University Agricultural Center, Baton Rouge, LA 70803, USA.ORCID 0000-0001-8924-0091
M Shahid MukhtarDepartment of Genetics & Biochemistry, Clemson University, 105 Collings St., Biosystems Research Complex, Clemson, SC 29634, USA.

Funding

Roadmap for America's Cancer Explorers for the 21st Century (Race 21)R25CA244092 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Lalita A. Shevde, J. Michael Wyss · 2020 to 2026
$2.4M
National Science Foundation DUE 1758292National Science Foundation IOS-2038872National Science Foundation OIA-2418230National Science Foundation OIA-2418231National Science Foundation OIA-2418232NCI NIH HHS R25 CA244092NIFA MIS-430030NIFA MSPBNIH HHS R25132976NIH HHS R25CA244092USDA LAB#94588USDA NRCS-CIG NR213A750013G014USDA_AFRI 2023-67019-39722USDA-NIFA 2022-6701-3036140USDA-NIFA 2023-68012-39002USDA-NIFA LAB94575
6 · The paper itself

Abstract

Drought and excess ambient temperature intensify abiotic and biotic stresses on agriculture, threatening food security and economic stability. The development of climate-resilient crops is crucial for sustainable, efficient farming. This review highlights the role of multi-omics encompassing genomics, transcriptomics, proteomics, metabolomics, and epigenomics in identifying genetic pathways for stress resilience. Advanced phenomics, using drones and hyperspectral imaging, can accelerate breeding programs by enabling high-throughput trait monitoring. Artificial intelligence (AI) and machine learning (ML) enhance these efforts by analyzing large-scale omics and phenotypic data, predicting stress tolerance traits, and optimizing breeding strategies. Additionally, plant-associated microbiomes contribute to stress tolerance and soil health through bioinoculants and synthetic microbial communities. Beyond agriculture, these advancements have broad societal, economic, and educational impacts. Climate-resilient crops can enhance food security, reduce hunger, and support vulnerable regions. AI-driven tools and precision agriculture empower farmers, improving livelihoods and equitable technology access. Educating teachers, students, and future generations fosters awareness and equips them to address climate challenges. Economically, these innovations reduce financial risks, stabilize markets, and promote long-term agricultural sustainability. These cutting-edge approaches can transform agriculture by integrating AI, multi-omics, and advanced phenotyping, ensuring a resilient and sustainable global food system amid climate change.

Indexed as

abiotic stressclimate changeepigenomicsgenomicsmachine learningmetabolomicsmicrobiomeproteomics

Identifiers

PMID40941864
PMCPMC12429994

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.