Evidence mapPaperPMID 40945847Full record

ReviewJournal of advanced research2026

Advances in high-throughput drug screening based on pharmacotranscriptomics.

Liansheng Qiao, Xiaoqian Huo, Wenting Huang, Zewen Wang, Yue Ren, Yanxia Liu, Qun Li, Yanling Zhang

Abstract readReview
In one paragraph

Review in Journal of advanced research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Liansheng QiaoKey Laboratory of TCM-information Engineer of State Administration of TCM, School of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing 102488, China.
Xiaoqian HuoSchool of Biomedicine, Beijing City University, Beijing 101309, China.
Wenting HuangState Key Laboratory for the Modernization of Classical and Famous Prescriptions of Chinese Medicine, Nanchang 330103, China.
Zewen WangKey Laboratory of TCM-information Engineer of State Administration of TCM, School of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing 102488, China.
Yue RenKey Laboratory of TCM-information Engineer of State Administration of TCM, School of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing 102488, China.
Yanxia LiuKey Laboratory of TCM-information Engineer of State Administration of TCM, School of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing 102488, China.
Qun LiKey Laboratory of TCM-information Engineer of State Administration of TCM, School of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing 102488, China.
Yanling ZhangKey Laboratory of TCM-information Engineer of State Administration of TCM, School of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing 102488, China. Electronic address: zhangyanling@bucm.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDrug screening constitutes the predominant paradigm for novel drug discovery. With the development of omics, drug screening has gradually developed into pharmacotranscriptomics-based drug screening (PTDS), which is different from target-based and phenotype-based drug screening. PTDS is a rapidly evolving interdisciplinary field that concurrently demands overcoming large-scale pharmacotranscriptomics profiling and computational challenges inherent to high-dimensional feature data. AIM OF REVIEW: This review aims to summarize the developmental trajectory and research advancements in PTDS, with a focus on large-scale pharmacotranscriptomics profiling and artificial intelligence-driven data mining. It elucidates the appropriate application fields of PTDS in comparison to traditional drug screening paradigms, thereby providing novel perspectives for the technological evolution and implementation of PTDS. Key scientific concepts of review: PTDS can detect gene expression changes following drug perturbation in cells on a large scale and analyze the efficacy of drug-regulated gene sets, signaling pathways, and even complex diseases by combining artificial intelligence. The technical evolution of PTDS is systematically summarized, encompassing advancements in high-throughput PTDS detection technologies and data analysis methods. PTDS is categorized into microarray, targeted transcriptomics, and RNA-seq. Data analysis of PTDS involves ranking, unsupervised learning, and supervised learning algorithms. All these methods remain active in research and industry, coexisting to address evolving drug screening needs. On this basis, the roles of PTDS in promoting pathway-based drug screening strategies are deeply explored for drug discovery and drug combination design. Meanwhile, we also focus on the application of PTDS in screening and mechanism analysis of traditional Chinese medicine (TCM), which reflects that PTDS is suitable for detecting the complex efficacy of drugs, especially TCM. PTDS is an important development direction for high-throughput screening. By combining with artificial intelligence, PTDS will greatly revolutionize our understanding of drug screening and promote new drug research and development.

Indexed as

Drug DiscoveryHigh-Throughput Screening AssaysPharmacogeneticsTranscriptomeAnimalsArtificial IntelligenceDrug Evaluation, PreclinicalGene Expression ProfilingHumansDrug screeningHigh-throughput screeningPathway-based drug screeningPharmacotranscriptomicsTraditional Chinese medicine

Identifiers

PMID40945847
PMCPMC13227165

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.