Evidence map›Paper›PMID 40949577›Full record

ArticleFrontiers in plant science2025

Distinct gene reprogramming in rosetted and symptomless shoots from the same mature rose plants infected with rose rosette virus.

Reghan Mutethia, Shakil Hosain, Venura Herath, Kevin Ong, Oscar Riera-Lizarazu, David Byrne, Michael V Kolomiets, Katherine M Berg-Falloure, Jeff Floyd, Jeanmarie Verchot

Abstract read
In one paragraph

Article in Frontiers in plant science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Reghan MutethiaDepartment of Plant Pathology and Microbiology, Texas A&M University, College Station, TX, United States.
Shakil HosainDepartment of Plant Pathology and Microbiology, Texas A&M University, College Station, TX, United States.
Venura HerathDepartment of Agricultural Biology, Faculty of Agriculture, University of, Peradeniya, Sri Lanka.
Kevin OngDepartment of Plant Pathology and Microbiology, Texas A&M University, College Station, TX, United States.
Oscar Riera-LizarazuDepartment of Horticultural Sciences, Texas A&M University, College Station, TX, United States.
David ByrneDepartment of Horticultural Sciences, Texas A&M University, College Station, TX, United States.
Michael V KolomietsDepartment of Plant Pathology and Microbiology, Texas A&M University, College Station, TX, United States.
Katherine M Berg-FalloureDepartment of Plant Pathology and Microbiology, Texas A&M University, College Station, TX, United States.
Jeff FloydBaylor University, Waco, TX, United States.
Jeanmarie VerchotDepartment of Plant Pathology and Microbiology, Texas A&M University, College Station, TX, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rose rosette virus (RRV) causes disease in rose shrubs manifesting as abnormal branch growth, stem thickening, increased thorniness, as well as malformed, discolored leaves and flowers. The uneven and strange development near apical regions and only in parts of the plant led us to investigate how RRV influences growth promoters to alter internal developmental programs. Leaf samples were collected from symptomatic (rosetted) and asymptomatic shoots of the same rose plants. We quantified viral RNA levels and analyzed the concentrations of some key hormones (abscisic acid [ABA], caffeic acid [CFA], indole acetic acid [IAA], and gibberellin [GA]). Additionally, gene expression profiling was performed, focusing on genes involved in hormone synthesis and signaling, auxin transport, and plant development. Viral RNA levels were unevenly distributed between rosetted and non-rosetted tissues. The ABA and IAA levels were similar between tissue types, whereas CFA and GA exhibited marked differences. We identified 39 genes with distinct or opposite expression in rosetted versus asymptomatic tissues, including

Indexed as

disease resistanceemaravirus/pathogenicityemaravirus/physiologygene expression profilingplant gene expression regulationplant virus diseaserose rosette virustranscriptomics

Identifiers

PMID40949577
PMCPMC12423424

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.