Evidence map›Paper›PMID 40953484›Full record

ReviewAnalytical chemistry2025

Securing the Future of NMR Metabolomics Reproducibility: A Call for Standardized Reporting.

Erik R Andersson, Amanda L Bayless, Robert B Brua, Fabio Casu, Leo L Cheng, Munki Choo, Arthur S Edison, Hamid R Eghbalnia, Candace C Fleischer, Goncalo J Gouveia and 18 more

Abstract readReview
In one paragraph

Review in Analytical chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Parsing Neurometabolic Signatures of Multiple Sclerosis with MRSI and cPCA.medRxiv : the preprint server for health sciences · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors.

Erik R AnderssonDepartment of Biological Sciences, University of Illinois at Chicago, Chicago, Illinois 60607, United States.ORCID 0000-0002-7968-7057
Amanda L BaylessChemical Sciences Division, National Institute of Standards and Technology(NIST), Charleston, South Carolina 29412, United States.
Robert B BruaNational Hydrology Research Centre, Environment and Climate Change Canada, Saskatoon, SK S7N 3H5, Canada.
Fabio CasuChemical Sciences Division, National Institute of Standards and Technology(NIST), Charleston, South Carolina 29412, United States.
Leo L ChengHarvard T.H. Chan School of Public Health, Boston, Massachusetts 02115, United States.
Munki ChooDepartment of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio 43210, United States.
Arthur S EdisonComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602, United States.ORCID 0000-0002-5686-2350
Hamid R EghbalniaDepartment of Molecular Biology and Biophysics, UConn Health, Farmington, Connecticut 06030-3305, United States.
Candace C FleischerDepartment of Radiology and Imaging Sciences, Emory University School of Medicine, Atlanta, Georgia 30322, United States.
Goncalo J GouveiaBoyce Thompson Institute, Cornell University, Ithaca, New York 14853, United States.ORCID 0000-0002-3022-7332
Jeffrey C HochDepartment of Molecular Biology and Biophysics, UConn Health, Farmington, Connecticut 06030-3305, United States.
Gagandeep KaurDepartment of Plant and Environmental Sciences, Clemson University, Clemson, South Carolina 29631, United States.
Da-Wei LiDepartment of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio 43210, United States.ORCID 0000-0002-3266-5272
Wimal PathmasiriDepartment of Nutrition, School of Public Health, Nutrition Research Institute, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, United States.ORCID 0000-0002-5199-5744
István PelczerDepartment of Chemistry, Princeton University, Princeton, New Jersey 08544, United States.ORCID 0000-0002-7806-6101
Fay ProbertDepartment of Chemistry, Chemistry Research Laboratory, University of Oxford, Mansfield Road, Oxford OX1 3TA, U.K.ORCID 0000-0002-8580-2023
Daniel RafteryNorthwest Metabolomics Research Center, Department of Anesthesiology and Pain Medicine, University of Washington, Seattle, Washington 98109, United States.ORCID 0000-0003-2467-8118
David RovnyakDepartment of Chemistry, Bucknell University, Lewisburg, Pennsylvania 17837, United States.ORCID 0000-0003-0328-5083
Michael SecretoDepartment of Biological Sciences, University of Illinois at Chicago, Chicago, Illinois 60607, United States.
Tracey B SchockChemical Sciences Division, National Institute of Standards and Technology(NIST), Charleston, South Carolina 29412, United States.ORCID 0000-0002-1808-7816
Panteleimon G TakisDepartment of Chemistry, University of Ioannina, Dourouti, Ioannina 45110, Greece.ORCID 0000-0002-7224-0412
Mario UchimiyaComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602, United States.ORCID 0000-0003-4802-1428
David S WishartDepartment of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada.ORCID 0000-0002-3207-2434
Ali YılmazOakland University William Beaumont School of Medicine, Rochester, Michigan 48309, United States.ORCID 0000-0001-9991-0554
Lloyd W SumnerDivision of Biochemistry, Bond Life Sciences Center, Interdisciplinary Plant Group, University of Missouri-Columbia, Columbia, Missouri 65211, United States.ORCID 0000-0002-4086-663X
Robert PowersDepartment of Chemistry, University of Nebraska-Lincoln, Lincoln, Nebraska 68588-0304, United States.ORCID 0000-0001-9948-6837
Valérie CopiéDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, Montana 59715, United States.ORCID 0000-0002-2778-1463
Teklab GebregiworgisDepartment of Biochemistry, Schulich School of Medicine and Dentistry, Western University, London, Ontario N6A 5C1, Canada.ORCID 0000-0002-1489-4813

Funding

Targeted mass spectrometry approaches to understand CART processing and recepter interactionsP20GM113126 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI GUO, JIANTAO · 2016 to 2025
$20.8M
Metabolic Control of gut-brain axis in Familial dysautonomia Supplement to parent grant 1R01DK117473-01A1 to support a PhD candidate/graduate student from an under-represented minorityR01DK117473 · NIDDK · MONTANA STATE UNIVERSITY - BOZEMAN · PI COPIE, VALERIE, WALK, SETH T · 2018 to 2022
$3.0M
A novel framework for quantifying metabolic brain healthDP2NS127704 · NINDS · EMORY UNIVERSITY · PI FLEISCHER, CANDACE C. · 2021 to 2024
$2.3M
NIDDK NIH HHS R01 DK117473NIGMS NIH HHS P20 GM113126NINDS NIH HHS DP2 NS127704
6 · The paper itself

Abstract

Metabolomics is a rapidly growing multidisciplinary field with ever increasing demand and usability, which is attracting a surge of new researchers. While their varied skill sets, scientific questions, and approaches enrich the field with fresh perspectives and innovation, individual investigators also bring wide-ranging levels of metabolomics-specific experience and diverse areas of interest. These factors introduce considerable variability and inconsistency in both the methodology and reporting. A recent comparative literature review of nuclear magnetic resonance (NMR) metabolomics from studies published in 2010 and 2020 revealed significant shortcomings in the reporting of experimental details necessary for evaluating both the scientific rigor and the reproducibility of NMR-based metabolomics experiments. Each stage of metabolomics research contains multiple methodological choices and various optimization parameters, all of which can introduce experimental bias and alter the study results. This emphasizes the need for proper reporting to enhance reproducibility, data reusability, and study comparability. To address these concerns, the NMR Special Interest Group within the Metabolomics Association of North America presents reporting recommendations focused on fundamental aspects of NMR metabolomics research identified from the detailed literature review report. These include specifics with respect to study design, sample preparation, data acquisition, data processing and analysis, data accessibility, and comparability to previous studies. Also presented is a complementary list of seminal papers in the field to guide the study design and implementation of NMR metabolomics experiments. This initiative seeks to enhance the long-term impact of NMR metabolomics by supporting high-quality, reproducible, and impactful data collected from well-executed and thoroughly reported studies.

Indexed as

MetabolomicsHumansMagnetic Resonance SpectroscopyReproducibility of Results

Identifiers

PMID40953484
PMCPMC12489887

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.