Evidence map›Paper›PMID 40958482›Full record

ArticleInfection & chemotherapy2025

Vitamin D Receptor Gene FokI Polymorphism in Patient with Human Immunodeficiency Virus - Tuberculosis Coinfection and Associated Risk Factors.

Anak Agung Ayu Yuli Gayatri, Ni Nyoman Ayu Dewi, I Gede Eka Wiratnaya, Ketut Tuti Parwati Merati

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Article in Infection & chemotherapy, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Anak Agung Ayu Yuli GayatriDivision of Tropical and Infectious Disease, Department of Internal Medicine, Faculty of Medicine, Udayana University, Ngoerah Hospital, Bali, Indonesia. yuli_gayatri@unud.ac.id.ORCID https://orcid.org/0000-0001-8277-8796
Ni Nyoman Ayu DewiDepartment of Biochemistry, Faculty of Medicine Udayana University, Denpasar, Bali, Indonesia.ORCID https://orcid.org/0000-0002-3886-4336
I Gede Eka WiratnayaDepartment of Orthopedic and Traumatology, Faculty of Medicine Udayana University, Ngoerah Hospital, Bali, Indonesia.ORCID https://orcid.org/0000-0002-3146-3046
Ketut Tuti Parwati MeratiDivision of Tropical and Infectious Disease, Department of Internal Medicine, Faculty of Medicine, Udayana University, Ngoerah Hospital, Bali, Indonesia.ORCID https://orcid.org/0000-0001-7592-2729

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThere is still unclear method for identifying people with human immunodeficiency virus (HIV) who will develop tuberculosis (TB). This study aimed to investigate the role of vitamin D receptor (VDR) gene FokI allele f and associated risk factors in HIV-TB coinfection. MATERIAL AND

methodsThis case control study was conducted with 60 total subjects consisting 30 subjects of HIV-TB patients as the case group and 30 subjects HIV without TB as the control. VDR gene FokI polymorphism was detected by polymerase chain reaction and sequencing, whereas light chain 3 (LC3) and caspase-3 levels were measured by enzyme-linked immunosorbent assay, and CD4 T cell by flowcytometry. Data analysis for different proportions used bivariate analysis and relationship analysis tests using logistic regression.

resultsThe VDR gene FokI (rs2228570) polymorphism proportion of f alleles in the case group were 26 (86.7%) and control 13 (43.3%). Low LC3 (LC3 ≤30 ng/mL) found in 27 (90.0%) of the cases and 9 of the controls (30.0%). Low caspase-3 (Caspase3 ≤3 ng/mL) found 28 (93.3%) in cases and 15 (50.0%) in the controls. The logistic regression analysis revealed that f allele of FokI VDR gene polymorphism, low LC3, low caspase-3 and low CD4 T cells are risk factors for HIV-TB co-infection as follows respectively; (odds ratio [OR], 6.921; 95% confidence interval [CI], 1.199-39.936;

conclusionVDR gene FokI polymorphism alleles f, low LC3, caspase-3, and low CD4 T cell count were identified as risk factors for HIV-TB Coinfection.

Indexed as

Caspase-3HIV-TB coinfectionLC3VDR gene FokI polymorphism

Identifiers

PMID40958482
PMCPMC12511745

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.