Evidence map›Paper›PMID 40974475›Full record

ArticleBiodegradation2025

Seasonal dynamics of microbial diversity and functional potential in active sanitary landfill baseliner microbiomes.

George Obinna Akuaka, Hazzeman Haris, Kamarul Zaman Zarkasi, Go Furusawa, Nyok-Sean Lau, Vine Nwabuisi Madukpe, Baderul Amin Abdul Hamid

Abstract read
In one paragraph

Article in Biodegradation, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

George Obinna AkuakaSchool of Biological Sciences, Universiti Sains Malaysia, 11800, Pulau Pinang, Malaysia.
Hazzeman HarisSchool of Biological Sciences, Universiti Sains Malaysia, 11800, Pulau Pinang, Malaysia. hazzeman@usm.my.
Kamarul Zaman ZarkasiSchool of Biological Sciences, Universiti Sains Malaysia, 11800, Pulau Pinang, Malaysia.
Go FurusawaCentre for Chemical Biology, Universiti Sains Malaysia, 11900, Bayan Lepas, Pulau Pinang, Malaysia.
Nyok-Sean LauCentre for Chemical Biology, Universiti Sains Malaysia, 11900, Bayan Lepas, Pulau Pinang, Malaysia.
Vine Nwabuisi MadukpeSchool of Mathematical Sciences, Universiti Sains Malaysia, 11800, Pulau Pinang, Malaysia.
Baderul Amin Abdul HamidMajlis Bandaraya Seberang Perai, Menara Bandaraya, Jalan Perda, Utama, Bandar Perda, 14000, Bukit Mertajam, Pulau Pinang, Malaysia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sanitary landfilling remains a cost-effective waste management strategy, employing engineered liners and leachate collection systems to mitigate environmental pollution. However, long-term degradation of compacted clay baseliners (CCLs) poses risks to environmental safety and groundwater quality. This study investigated seasonal and habitat-specific microbial communities within CCLs and leachate from the Pulau Burung Sanitary Landfill, Pinang, Malaysia, utilizing 16S rRNA gene amplicon sequencing and functional prediction via PICRUSt2. Triplicate samples were collected from leachate and baseliner layers (0-30 cm depth) during both rainy and dry seasons, alongside assessments of physicochemical properties and permeability. Significant seasonal differences (p < 0.05) were observed in the physicochemical profiles of leachate and baseliner samples. Baseliner microbiomes exhibited greater compositional stability and smaller beta-diversity shifts compared to the more dynamic leachate communities. Alpha diversity increased in both matrices during the dry season, although changes in baseliner richness were not statistically significant (p > 0.05). Microbial community shifts were primarily driven by seasonal variations in environmental parameters. Core phyla shared across both habitats included Pseudomonadota (31.15-45.88%), Bacillota (8.58-31.15%), Actinobacteriota (6.22-19.58%), Acidobacteriota (0.16-15.85%), Chloroflexota (0.85-13.84%), and Bacteroidota (1.38-12.74%). Additional phyla such as Patescibacteria (0.77-2.06%), Cyanobacteria (0.12-6.16%), Desulfobacterota (0.77-5.38%), and Verrucomicrobiota (0.59-2.33%) showed matrix-specific enrichment. Functional prediction revealed distinct enzyme profiles and metabolic pathway enrichment. Anaerobic genera such as Geobacter, Desulfuromonas, Desulfuromusa, Pseudopelobacter, Desulfotomaculum, Clostridium, Desulfitobacterium, Telmatospirillum, and Dethiobacter were associated with redox cycling and mineral-transforming processes, suggesting potential contributions to increased clay porosity and reduced structural integrity. These findings demonstrate the ecological and functional complexity of landfill microbiomes and their potential role in compromising barrier performance. The study recommends routine monitoring of microbial functional genes and the development of biogeochemically resilient clay blends or in situ biobarriers to enhance long-term containment efficacy.

Indexed as

BacteriaMicrobiotaWaste Disposal FacilitiesBiodegradation, EnvironmentalRNA, Ribosomal, 16SSeasonsSoil MicrobiologyWater Pollutants, ChemicalRNA, Ribosomal, 16SWater Pollutants, Chemical16S rRNA sequencingEnvironmental safetyMicrobial communitySanitary landfillSeasonal variationsWaste management

Identifiers

PMID40974475
PMCPMC12450122

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.