Evidence map›Paper›PMID 40977499›Full record

ArticleAnnals of botany2026

Antibiotic resistance genes detected in lichens: insights from Cladonia stellaris.

Marta Alonso-García, Paul B L George, Samantha Leclerc, Marc Veillette, Caroline Duchaine, Juan Carlos Villarreal A

Abstract read
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Article in Annals of botany, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Marta Alonso-GarcíaInstitut de Biologie Intégrative et des Systèmes (IBIS), Université Laval, Québec G1V 0A6, Canada.
Paul B L GeorgeDépartement de Biochimie, Microbiologie et de bio-Informatique, Université Laval, Québec G1V 0A6, Canada.
Samantha LeclercDépartement de Biochimie, Microbiologie et de bio-Informatique, Université Laval, Québec G1V 0A6, Canada.
Marc VeilletteInstitut Universitaire de Cardiologie et de Pneumologie de Québec, Université Laval, Québec G1V 4G5, Canada.
Caroline DuchaineDépartement de Biochimie, Microbiologie et de bio-Informatique, Université Laval, Québec G1V 0A6, Canada.
Juan Carlos Villarreal AInstitut de Biologie Intégrative et des Systèmes (IBIS), Université Laval, Québec G1V 0A6, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsAntibiotics are natural compounds produced by microorganisms that have long existed in ecosystems. However, the widespread clinical and agricultural use of antibiotics has intensified selective pressures on bacteria, leading to the proliferation of antibiotic resistance genes (ARGs). The increasing prevalence of these genetic elements in clinical and environmental settings now poses a major global health threat. While ARGs are well documented in anthropogenically influenced environments, their distribution and origins in remote ecosystems, such as boreal forests, remain poorly understood. Here, we investigate the occurrence, diversity and potential origins of ARGs in the boreal lichen Cladonia stellaris.

methodsWe conducted the first targeted assessment of ARGs in lichens by analysing 42 C. stellaris samples from northern and southern lichen woodlands in eastern Canada. Using high-throughput quantitative PCR, we screened for 33 ARGs and three mobile genetic elements (MGEs), quantifying their relative abundance. Bacterial community composition was characterized via 16S rRNA gene sequencing. Statistical analyses evaluated geographical patterns, co-occurrence between ARGs and bacterial taxa, and the influence of latitude on ARG distribution. KEY

resultsTen ARGs conferring resistance to four antibiotic classes (aminoglycosides, beta-lactams, quinolones and sulfonamides), along with one MGE, were detected. The ARGs blaCTX-M-1, qnrB and qepA were highly prevalent, with qepA often surpassing 16S rRNA gene abundance. Only qnrB showed significantly higher abundance in southern samples. Latitude significantly influenced ARG profiles, whereas bacterial community composition did not.

conclusionsOur findings demonstrate that C. stellaris harbours diverse ARGs in remote boreal ecosystems with limited anthropogenic influence. Proposed explanations for ARG presence include long-distance dispersal via bioaerosols and endogenous development within lichen microbiomes, yet these remain speculative. Future work incorporating bacterial isolation, whole-genome sequencing, metatranscriptomics, air sampling and metabolomic profiling is necessary to unravel the ecology and evolution of ARGs in natural habitats.

Indexed as

AscomycotaDrug Resistance, MicrobialLichensAnti-Bacterial AgentsRNA, Ribosomal, 16SAnti-Bacterial AgentsRNA, Ribosomal, 16SAntibiotic resistance genesbeta-lactamasebioaerosolsboreal ecosystemsCladonia stellariscoevolutionlichen microbiomelichen woodlandsmobile genetic elementsquinolone resistance

Identifiers

PMID40977499
PMCPMC12784081

What Socratic holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.