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ArticleFrontiers in plant science2025

Tomato seedling stem and leaf segmentation method based on an improved ResNet architecture.

Lina Zhang, Xinying Li, Zhiyin Yang, Bo Yang, Shengpeng Yu, Shuai Zhao, Ziyi Huang, Xingrui Zhang, Han Yang, Yixing Lin and 2 more

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Article in Frontiers in plant science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

12 authors.

Lina ZhangCollege of Information Technology, Jilin Agricultural University, Changchun, China.
Xinying LiCollege of Information Technology, Jilin Agricultural University, Changchun, China.
Zhiyin YangCollege of Information Technology, Jilin Agricultural University, Changchun, China.
Bo YangCollege of Information Engineering, Changchun University of Finance and Economics, Changchun, China.
Shengpeng YuCollege of Information Technology, Jilin Agricultural University, Changchun, China.
Shuai ZhaoCollege of Information Technology, Jilin Agricultural University, Changchun, China.
Ziyi HuangCollege of Information Technology, Jilin Agricultural University, Changchun, China.
Xingrui ZhangCollege of Information Technology, Jilin Agricultural University, Changchun, China.
Han YangCollege of Information Technology, Jilin Agricultural University, Changchun, China.
Yixing LinCollege of Information Technology, Jilin Agricultural University, Changchun, China.
Helong YuCollege of Information Technology, Jilin Agricultural University, Changchun, China.
Minglai YangCollege of Information Technology, Jilin Agricultural University, Changchun, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: The phenotypic traits of tomato plants reflect their growth status, and investigating these characteristics can improve tomato production. Traditional deep learning models face challenges such as excessive parameters, high complexity, and susceptibility to overfitting in point cloud segmentation tasks. To address these limitations, this paper proposes a lightweight improved model based on the ResNet architecture. Methods: The proposed network optimizes the traditional residual block by integrating bottleneck modules and downsampling techniques. Additionally, by combining curvature features and geometric characteristics, we custom-designed specialized convolutional layers to enhance segmentation accuracy for tomato stem and leaf point clouds. The model further employs adaptive average pooling to improve generalization and robustness. Results: Experimental validation demonstrated that the optimized model achieved a training accuracy of 95.11%, a 3.26% improvement over the traditional ResNet18 model. Testing time was reduced to 4.02 seconds (25% faster than ResNet18's 5.37 seconds). Phenotypic parameter extraction yielded high correlation with manual measurements, with coefficients of determination (R²) of 0.941 (plant height), 0.752 (stem diameter), 0.945 (leaf area), and 0.943 (leaf inclination angle). The root mean square errors (RMSE) were 0.506, 0.129, 0.980, and 3.619, respectively, while absolute percentage errors (APE) remained below 6% (1.965%-5.526%). Discussion: The proposed X-ResNet model exhibits superior segmentation performance, demonstrating high accuracy in phenotypic trait extraction. The strong correlations and low errors between extracted and manually measured data validate the feasibility of 3D point cloud technology for tomato phenotyping. This study provides a valuable benchmark for plant phenotyping research, with significant practical and theoretical implications.

Indexed as

bottleneck blockdownsamplinglightweight networkplant phenotypestem and leaf segmentation in point cloud

Identifiers

PMID40978790
PMCPMC12444385

What Socratic holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.