Evidence map›Paper›PMID 40986564›Full record

ArticlePloS one2025

Mitochondrial polymorphism of sea beet (Beta vulgaris ssp. maritima), a species with cytoplasmic male sterility.

Tomoki Murata, Hiroyo Kagami-Katsuyama, Mion Oishi, Haruto Tanaka, Chihiro Sano, Jun Kashikura, Ryo Hayakawa, Keishi Kubota, Eigo Taniguchi, Keita Suzuki and 2 more

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Tomoki MurataResearch Faculty of Agriculture, Hokkaido University, Sapporo, Japan.
Hiroyo Kagami-KatsuyamaDepartment of Medical Management and Informatics, Hokkaido Information University, Ebetsu, Japan.
Mion OishiResearch Faculty of Agriculture, Hokkaido University, Sapporo, Japan.
Haruto TanakaResearch Faculty of Agriculture, Hokkaido University, Sapporo, Japan.
Chihiro SanoResearch Faculty of Agriculture, Hokkaido University, Sapporo, Japan.
Jun KashikuraResearch Faculty of Agriculture, Hokkaido University, Sapporo, Japan.
Ryo HayakawaResearch Faculty of Agriculture, Hokkaido University, Sapporo, Japan.
Keishi KubotaResearch Faculty of Agriculture, Hokkaido University, Sapporo, Japan.
Eigo TaniguchiResearch Faculty of Agriculture, Hokkaido University, Sapporo, Japan.
Keita SuzukiResearch Faculty of Agriculture, Hokkaido University, Sapporo, Japan.
Kazuyoshi KitazakiResearch Faculty of Agriculture, Hokkaido University, Sapporo, Japan.ORCID https://orcid.org/0000-0003-3012-0604
Tomohiko KuboResearch Faculty of Agriculture, Hokkaido University, Sapporo, Japan.ORCID https://orcid.org/0000-0001-6045-0167

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cytoplasmic male sterility (CMS), a form of mitochondrion-induced male sterility, is a valuable trait for hybrid breeding in crop production. However, CMS is not universally present across all crop species, prompting ongoing efforts to identify CMS sources within genetic resources. The discovery of CMS could be facilitated by the development of predictive indices indicating the presence of CMS-associated mitochondria. One theory has proposed that populations containing CMS-expressing plants exhibit elevated mitochondrial polymorphism. Sea beet, a species known to harbor CMS, provides a suitable system for testing this prediction. We first conducted network analysis by using mitochondrial single nucleotide polymorphism sites extracted from publicly available nucleotide sequence data. The resulting network, constructed from 270 sea beet sequences, was complex yet characterized by several star-like clusters. Haplotypes from Mediterranean region were dispersed across the network, while those from Atlantic coast tended to cluster, supporting the hypothesis that sea beet originated in the Mediterranean area and later migrated to the Atlantic coast. We then analyzed four mitochondrial minisatellites-variable number of tandem repeat loci- across 973 plants of 172 sea beet accessions. Combination of alleles at these four loci defined 29 distinct mitotypes. Analysis of mitotype distribution revealed similarly high mitochondrial polymorphism (~0.87) in both the Mediterranean and the Atlantic regions, despite their genic differentiation. Most subregions within these areas contained 8-15 mitotypes; however, Denmark was a notable exception, with only a single mitotype detected among 139 plants from 11 accessions. This mitochondrial monomorphism contrasts with the diversity observed in neighboring Atlantic subregions, indicating that Danish sea beet constitutes an exceptional population. Notably, the Danish mitotype was not associated with any CMS, suggesting that the population may be devoid of CMS mitochondria- a condition in which the proposed mechanism for increased mitochondrial polymorphism would not be operative.

Indexed as

Beta vulgarisCytoplasmDNA, MitochondrialMitochondriaPlant InfertilityPolymorphism, GeneticPolymorphism, Single NucleotideHaplotypesDNA, Mitochondrial

Identifiers

PMID40986564
PMCPMC12456822

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.