Evidence map›Paper›PMID 40991719›Full record

ArticlePlant physiology2025

Apocarotenoid signaling regulates meristem activity and shapes shoot and root lateral organ formation in Arabidopsis.

Julio Sierra, Lina Escobar-Tovar, Selene Napsucialy-Mendivil, Omar Oltehua-López, Kenny Alejandra Agreda-Laguna, Joseph G Dubrovsky, Ryan P McQuinn, Patricia León

Abstract read
In one paragraph

Article in Plant physiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Julio SierraDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos 62210, Mexico.ORCID 0000-0003-2941-3872
Lina Escobar-TovarDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos 62210, Mexico.ORCID 0000-0001-9465-3237
Selene Napsucialy-MendivilDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos 62210, Mexico.ORCID 0000-0002-2692-2172
Omar Oltehua-LópezDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos 62210, Mexico.ORCID 0000-0002-6014-5629
Kenny Alejandra Agreda-LagunaDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos 62210, Mexico.ORCID 0000-0003-1985-9408
Joseph G DubrovskyDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos 62210, Mexico.ORCID 0000-0002-2072-4650
Ryan P McQuinnSchool of Science, Western Sydney University, Penrith, NSW 2750, Australia.ORCID 0000-0002-5549-5181
Patricia LeónDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos 62210, Mexico.ORCID 0000-0002-4401-3669

Funding

CONAHCYTDGAPA-UNAM IN203024DGAPA-UNAM IN207320DGAPA-UNAM IN2089923Pew Charitable Trusts Innovation FundUNAM-PASPA
6 · The paper itself

Abstract

Plastids synthesize signals crucial for plant development, including carotenoid-derived molecules with hormonal and retrograde signaling functions that regulate nuclear gene expression, which is an emerging research area. Here we investigate the function of the plastid-derived apocarotenoid signal 1 (ACS1), whose accumulation disrupts plastid biogenesis, affects lateral organ formation, and compromises apical meristem maintenance. By modulating ACS1 levels in Arabidopsis (Arabidopsis thaliana) through different light conditions, we show its reversible and dynamic role in leaf and root development. Notably, the characteristic morphological defects of ACS1-accumulating mutants revert under conditions that limit its synthesis, even several days post-germination. This indicates that ACS1 does not cause irreversible damage but rather acts as a signal produced under specific tissues and conditions that associates with the cell-specific expression of its biosynthetic enzymes. Transcriptomic analysis of ACS1-accumulating mutants shows a critical developmental window during which ACS1 affects the expression of numerous plastid-housekeeping genes, correlating with an early block in plastid biogenesis after DNA replication and before transcriptional activation. This disruption affects chloroplast biogenesis and amyloplast starch accumulation. ACS1 accumulation also alters the expression of key developmental regulators, including genes involved in auxin signaling and transport, leading to compromised meristem maintenance and leaf expansion. Beyond photosynthetic tissues, ACS1 also disrupts root apical meristem organization, notably altering columella cell patterning and gravitropic responses. Overall, our findings establish ACS1 as a dynamic conditionally active plastid-derived signal that modulates plastid differentiation, meristem activity, and lateral organ development, underscoring the broader role of cis-carotenoid-derived signals in coordinating plastid function with plant growth and development.

Indexed as

ArabidopsisArabidopsis ProteinsCarotenoidsMeristemPlant RootsPlant ShootsSignal TransductionGene Expression Regulation, PlantMutationPlant LeavesPlastidsArabidopsis ProteinsCarotenoids

Identifiers

PMID40991719
PMCPMC12508801

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.