Evidence map›Paper›PMID 41004487›Full record

ArticlePloS one2025

Multi-omics analysis of parthanatos related molecular subgroup and prognostic model development in stomach adenocarcinoma.

Xiangxin Wu, Lianming Cai, Yanping Liu, Bowen Wang, Tianyi Xia, Zhenhua Liu

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xiangxin WuDepartment of Abdominal Surgery, Ganzhou Cancer Hospital, Ganzhou, China.
Lianming CaiDepartment of Abdominal Surgery, Ganzhou Cancer Hospital, Ganzhou, China.
Yanping LiuDepartment of Abdominal Surgery, Ganzhou Cancer Hospital, Ganzhou, China.
Bowen WangDepartment of Abdominal Surgery, Ganzhou Cancer Hospital, Ganzhou, China.
Tianyi XiaDepartment of Colorectal Surgery, Harbin Medical University Cancer Hospital, Harbin Medical University, Harbin, China.ORCID https://orcid.org/0009-0007-9797-9639
Zhenhua LiuDepartment of Abdominal Surgery, Ganzhou Cancer Hospital, Ganzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stomach adenocarcinoma (STAD), the most prevalent histological subtype of gastric cancer, exhibits high heterogeneity and poor prognosis, posing significant therapeutic challenges. Parthanatos, a distinct form of regulated cell death mediated by poly (ADP-ribose) polymerase-1 (PARP-1), has been implicated in tumor biology and therapeutic resistance; however, the role of parthanatos-associated genes (PRGs) in STAD remains largely unexplored. In this study, we performed a comprehensive multi-omics analysis integrating transcriptomic, genomic, and clinical data from public databases to delineate the molecular landscape of PRGs in STAD. Unsupervised clustering revealed distinct PRG-related molecular subtypes with significant differences in clinical outcomes, immune infiltration profiles, and biological pathway activation. Based on machine learning algorithms, we established and validated a novel PRG-based prognostic signature, which demonstrated robust predictive performance. Moreover, single-cell RNA sequencing and in vitro functional assays were conducted to explore cellular heterogeneity and gene function. Notably, in vitro experiments, including western blot, colony formation, CCK-8, and Transwell assays, confirmed that one key PRG, COL8A1, promotes STAD cell proliferation and migration. Collectively, our findings highlight the clinical and biological significance of PRGs in STAD, offering novel biomarkers and potential therapeutic targets for STAD precision treatment.

Indexed as

AdenocarcinomaStomach NeoplasmsBiomarkers, TumorCell Line, TumorCell MovementCell ProliferationFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGenomicsHumansMaleMultiomicsPoly (ADP-Ribose) Polymerase-1PrognosisTranscriptomeBiomarkers, TumorPARP1 protein, humanPoly (ADP-Ribose) Polymerase-1

Identifiers

PMID41004487
PMCPMC12469114

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.