Evidence map›Paper›PMID 41006309›Full record

ArticleScientific data2025

Chromatin landscape, transcriptomic and ChIP-seq profiling of Anopheles stephensi MSQ43 cell line.

Varvara Lukyanchikova, Miroslav Nuriddinov, Anna Khabarova, Maria Gridina, Andrey Popov, Polina Belokopytova, Igor V Sharakhov, Veniamin Fishman

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Varvara LukyanchikovaInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia.ORCID 0000-0002-1828-4721
Miroslav NuriddinovInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia.
Anna KhabarovaInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia.ORCID 0000-0002-9425-9763
Maria GridinaInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia.
Andrey PopovInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia.
Polina BelokopytovaInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia.
Igor V SharakhovDepartment of Entomology, Virginia Polytechnic Institute and State University, Blacksburg, VA, 24061, USA.ORCID 0000-0003-0752-3747
Veniamin FishmanInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia. minja-f@yandex.com.

Funding

Russian Science Foundation (RSF) 22-14-00247Russian Science Support Foundation 22-14-00247
6 · The paper itself

Abstract

Anopheles mosquitoes are known as dominant vectors of malaria parasites and other viral and bacterial pathogens. Deciphering Anopheles genomes has opened a new era of research and allowed in-depth investigation of several molecular mechanisms involved in pathogen transmission. However, there is a lack of appropriate model systems to study specific vector-pathogen interactions at the molecular level. Even inbred mosquito colonies represent genetically heterogeneous population and require special care facilities. Insect cell cultures could serve as a useful alternative due to the ease of handling and maintenance, especially for genomic studies requiring millions of cells per experiment. Here, we provide chromatin contact maps and a dataset of epigenetic characteristics, including histone mark profiles and RNA-seq data, as well as transfection conditions and promoter specificity for the mosquito cell line MSQ43.

Indexed as

AnophelesChromatinTranscriptomeAnimalsCell LineChromatin Immunoprecipitation SequencingEpigenesis, GeneticMosquito VectorsChromatin

Identifiers

PMID41006309
PMCPMC12474893

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.