Evidence mapPaperPMID 41007990Full record

ArticleAnimals : an open access journal from MDPI2025

Whole Genome Resequencing Reveals the Genetic Basis of Desert Arid Climate Adaptation in Lop Sheep.

Chenchen Yang, Changhai Gong, Abliz Khamili, Xiaopeng Li, Qifeng Gao, Hong Chen, Xin Xiang, Jieru Wang, Chunmei Han, Qinghua Gao

Abstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Chenchen YangCollege of Animal Science and Technology, Tarim University, Alar 843300, China.
Changhai GongXinjiang Bazhou Animal Husbandry Work Station, Bazhou 841000, China.
Abliz KhamiliBureau of Agriculture and Rural Development, Ruoqiang County, Bazhou 841000, China.
Xiaopeng LiCollege of Animal Science and Technology, Tarim University, Alar 843300, China.ORCID 0000-0003-0796-0795
Qifeng GaoCollege of Life Science and Technology, Tarim University, Alar 843300, China.
Hong ChenCollege of Life Science and Technology, Tarim University, Alar 843300, China.ORCID 0000-0002-1623-507X
Xin XiangCollege of Animal Science and Technology, Tarim University, Alar 843300, China.ORCID 0009-0004-3198-5671
Jieru WangCollege of Animal Science and Technology, Tarim University, Alar 843300, China.ORCID 0009-0004-1964-2924
Chunmei HanCollege of Animal Science and Technology, Tarim University, Alar 843300, China.
Qinghua GaoCollege of Animal Science and Technology, Tarim University, Alar 843300, China.

Funding

GWAS-based screening of candidate genes for polyembryony traits in Xinjiang Lop sheep; Southwards Innovation Team for Collegiate Utilisation of High Quality Sheep Germplasm Resources in the Circum-Tarim Region; Autonomous Region Sheep Industry Technology BSGJSYS202304; 2019CB010; XJARS-09-17
6 · The paper itself

Abstract

The Lop sheep (LOP), a unique local breed from Xinjiang, exhibits remarkable resilience to the harsh conditions of a desert arid climate and frequent sandstorms, alongside notable fecundity characteristics. This study aims to investigate the adaptability of LOP within this challenging environment by collecting whole blood samples from 110 LOP individuals in the Lop Nur region of Xinjiang for genome resequencing. The resulting data will be compared with whole genome resequencing information from 22 local sheep breeds worldwide to analyze the origin and evolution of LOP. Additionally, comparisons will be made with HUS sheep from warm and humid regions to identify genomic differences through selection signal analysis, thereby assessing the impact of a desert arid climate on the extreme living conditions of LOP. Finally, qPCR was used to preliminarily analyse the impact of the desert arid climate on the genome of the Bactrian sheep. Genetic diversity results indicate that LOP exhibits a relatively stable genetic structure alongside high genetic diversity. The results of population structure analysis and gene flow indicate that we can tentatively posit that LOP is a breed that originated from the Middle East, subsequently mixing with MGS upon its arrival in Xinjiang. Chinese local sheep breeds trace their origins to AMS, with the gene flow evolving from west to east, progressing through mountainous hills (BSBS), basins (LOP, HTS, CLHS, DLS), plains (MGS, TANS), and coastal areas (HUS). LOP is associated with ALTS, BSBS, HTS, CLHS, and DLS, as well as with MGS, HUS, TANS, WDS, and SSSP, in a context of gene exchange, with the degree of exchange diminishing in that order. Selection signal analysis revealed that the candidate genes identified are closely related to adaptation to desert arid climates and disease resistance (

Indexed as

desert arid climateenvironmental adaptationLop sheeporigin and evolutionselection signal

Identifiers

PMID41007990
PMCPMC12466512

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.