Evidence map›Paper›PMID 41013440›Full record

ArticleBMC biology2025

Machine learning combined with omics-based approaches reveals T-lymphocyte cellular fate imbalance in abdominal aortic aneurysm.

Demin Li, Ge Zhang, Pengchong Du, Chang Cao, Xuyu He, Yan Lv, Peiyu Yuan, Yujia Wang, Ruhao Wu, Yifan Cao and 7 more

Abstract read
In one paragraph

Article in BMC biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Demin Li *Department of Cardiology, First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.
Ge Zhang *Department of Cardiology, First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.
Pengchong Du *Department of Cardiology, First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.
Chang Cao *Department of Cardiology, First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.
Xuyu HeDepartment of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, 02115, USA.
Yan LvDepartment of Cardiology, First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.
Peiyu YuanDepartment of Cardiology, First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.
Yujia WangDepartment of Cardiology, First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.
Ruhao WuDepartment of Respiratory and Critical Care Medicine, First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.
Yifan CaoDepartment of Cardiology, First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.
Yu YangDepartment of Cardiology, First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.
Jiamin GaoDepartment of Cardiology, First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.
Bo LanDepartment of Cardiology, First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.
Guo-Ping ShiDepartment of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, 02115, USA. gpshi@seu.edu.cn.
Xiaolin CuiSchool of Medicine, The Chinese University of Hong Kong (Shenzhen), Shenzhen, 518172, China. stevencui@cuhk.edu.cn.
Jinying ZhangDepartment of Cardiology, First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China. jyzhang@zzu.edu.cn.
Junnan TangDepartment of Cardiology, First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China. fcctangjn@zzu.edu.cn.

Funding

Role of Mast cells in Alzheimer's DiseaseR01AG063839 · NIA · BRIGHAM AND WOMEN'S HOSPITAL · PI LIBBY, PETER · 2020 to 2024
$3.1M
Role of group 2 innate lymphoid cells in myocardial infarctionR01HL157073 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI LIBBY, PETER · 2022 to 2025
$2.7M
Role of ILC2 and eosinophils in abdominal aortic aneurysmR01HL151627 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI LIBBY, PETER · 2021 to 2024
$2.7M
Role of eosinophil cationic proteins in cardiac hypertrophyR01HL166538 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI LIBBY, PETER · 2023 to 2025
$2.1M
Role of CLCA1 as a MIF decoy inhibitor in abdominal aortic aneurysmsR01HL170000 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI Peter Libby · 2024 to 2026
$2.1M
Funding for Scientific Research and InnovationTeam of The First Affiliated Hospital of Zhengzhou University QNCXTD2023001Funding for Scientific Research and InnovationTeam of The First Affiliated Hospital of Zhengzhou University ZYCXTD2023008Henan Province Key R&D Program 241111313300Henan Province Medical Science and Technology Key Joint Project SBGJ202101012Henan Zhongyuan Medical Science and Technology Innovation and Development Foundation Project ZYYC202305ZDInnovation Scientists and Technicians Troop Construction Projects of Henan Province 254000510006Jointly Established Project of the Henan Provincial Medical Science and Technology Research Program LHGJ20240225National Heart Foundation of New Zealand 1896, 1891National Natural Science Foundation of China 82222007National Natural Science Foundation of China U2004203New Zealand Health Research Council Explorer grant 19/779New Zealand Ministry for Business, Employment and Innovation MWF-UOO2103NHLBI NIH HHS R01 HL151627NHLBI NIH HHS R01 HL157073NHLBI NIH HHS R01 HL166538NHLBI NIH HHS R01 HL170000NIA NIH HHS R01 AG063839the National Heart, Lung, and Blood Institute HL151627, HL157073, HL166538 and HL170000the National Institute of Neurological Disorders and Stroke AG063839
6 · The paper itself

Abstract

backgroundAbdominal aortic aneurysm (AAA) is typically an asymptomatic disease closely associated with immune mechanisms. A deep understanding of cellular responses within AAA tissues, particularly the molecular changes in T-cell populations, is critical for disease diagnosis and treatment. However, the specific mechanisms inducing T-lymphocyte fate imbalance in AAA remain to be elucidated.

resultsThe analysis revealed the core mechanisms driving T-lymphocyte fate imbalance in AAA. We successfully established a comprehensive regulatory map encompassing T-cell infiltration regulatory features, critical transcription factors, and dysregulated immune signaling pathways. Machine learning algorithms identified transcription factors FOSB and JUNB as key biomarkers. Validation across multiple independent datasets and clinical samples confirmed the feasibility and accuracy of FOSB and JUNB as clinical diagnostic biomarkers for AAA.

conclusionsThrough the analysis of single-cell and bulk data, hallmarks of human AAA cellular landscape and T-cell comprehensive developmental relationships were recapitulated. This study identified important roles of T-cell and the molecular mechanisms for the dynamic T-cell infiltrating process, which could characterize disease status and landscape of human AAA microenvironment. Using the deep learning algorithms, FOSB and JUNB were demonstrated as pivotal biomarkers of AAA, together with screening the potential pharmacologic agents targeting T-cell polarization. Taken together, this expands the current understanding of AAA pathogenesis and may provide a feasible immune-targeted therapeutic strategy.

Indexed as

Aortic Aneurysm, AbdominalMachine LearningT-LymphocytesBiomarkersHumansBiomarkersAbdominal aortic aneurysmImmunological microenvironmentMachine learningRegulation networkSingle-cell RNA sequencingT cells

Identifiers

PMID41013440
PMCPMC12465141

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.