Evidence map›Paper›PMID 41014475›Full record

ArticleJournal of endocrinological investigation2026

Sperm DNA methylation landscape in infertile men with clinical varicocele: unravelling the treatment effect.

Deepshikha Arya, Delna Irani, Rahul Gajbhiye, Deepti Tandon, Priyank Kothari, Prakash Pawar, Dipty Singh

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of endocrinological investigation, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Deepshikha AryaDepartment of Neuroendocrinology, ICMR-National Institute for Research in Reproductive and Child Health, J.M. Street, Parel, Mumbai, 400012, Mumbai, India.
Delna IraniDepartment of Neuroendocrinology, ICMR-National Institute for Research in Reproductive and Child Health, J.M. Street, Parel, Mumbai, 400012, Mumbai, India.
Rahul GajbhiyeClinical Research Laboratory, ICMR-National Institute for Research in Reproductive and Child Health, Parel, Mumbai, 400012, India.
Deepti TandonDepartment of Clinical Research, ICMR-National Institute for Research in Reproductive and Child Health, Parel, Mumbai, 400012, India.
Priyank KothariTopiwala National Medical College and Bai Yamunabai Laxman Nair Charitable Hospital, Mumbai, 400008, India.
Prakash PawarLokmanya Tilak Municipal General Hospital, Sion, Mumbai, 400022, India.
Dipty SinghDepartment of Neuroendocrinology, ICMR-National Institute for Research in Reproductive and Child Health, J.M. Street, Parel, Mumbai, 400012, Mumbai, India. singhd@nirrch.res.in.ORCID http://orcid.org/0000-0002-3950-0083

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeVaricocele has been associated with reduced male fertility potential. Treatment modalities for varicocele improve semen parameters, yet more than 50% of cases remain infertile. Varicocele-induced heat and hypoxia stress may cause aberrant epigenetic modifications, possibly leading to abnormal sperm functions. This study aims to investigate the genome-wide sperm DNA methylation alterations in infertile men with clinical varicocele and evaluate the effect of varicocele treatment on methylation and fertility status.

methodsThis study includes 30 healthy fertile men and 50 infertile men with clinical varicocele. Whole genome bisulfite sequencing (WGBS) was employed to identify differentially methylated CpG (DMC) sites in sperm genomic DNA of the infertile men with varicocele compared to the fertile controls. DMCs located within genes associated with spermatogenesis and sperm functions were selected for validation in larger study population by pyrosequencing. Varicocele group were followed up after 3 months of either antioxidant treatment or varicocelectomy, and sperm DNA methylation changes were evaluated. Participants were monitored for 1 to 2 years following treatment to evaluate their fertility status.

resultsFrom WGBS analysis, a total of 6414 DMCs and 1484 differentially methylated genes (DMGs) were identified. Signalling pathways involved in spermatogenesis process and sperm functions were enriched in the pathway analysis. Selected DMC within gene H2AX was significantly hypermethylated, and CDKN1B and BCR were hypomethylated in varicocele study population. However, after 3 months of varicocele treatment (both modes), notable restoration could only be observed in H2AX and CDKN1B DMCs. 20% of the follow-up patients achieved fertility after varicocele treatment and demonstrated a reversal of DNA methylation alterations.

conclusionThis study highlights the altered sperm DNA methylation landscape and its possible implications on altered spermatogenesis and sperm function in clinical varicocele cases. It also presents insights into the possibility of restoration of altered DNA methylation levels following varicocele treatment.

Indexed as

DNA MethylationInfertility, MaleSpermatozoaVaricoceleAdultCase-Control StudiesEpigenesis, GeneticFollow-Up StudiesHumansMaleSpermatogenesisDNA methylationMale infertilityVaricoceleVaricocele treatmentWhole genome bisulfite sequencing

Identifiers

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.