Evidence map›Paper›PMID 41078336›Full record

ArticleMolecular microbiology2025

The Gfr Uptake System Provides a Context-Dependent Fitness Advantage to Salmonella Typhimurium SL1344 During the Initial Gut Colonization Phase.

Lea Fuchs, Cora Lisbeth Dieterich, Elena Melgarejo Ros, Philipp Keller, Anna Sintsova, Leanid Laganenka, Thomas A Scott, Christopher Schubert, Shinichi Sunagawa, Julia A Vorholt and 3 more

Abstract read
In one paragraph

Article in Molecular microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Infection strategies ofGut microbes reports · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Lea FuchsInstitute of Microbiology, ETH Zürich, Zürich, Switzerland.
Cora Lisbeth DieterichInstitute of Microbiology, ETH Zürich, Zürich, Switzerland.
Elena Melgarejo RosInstitute of Microbiology, ETH Zürich, Zürich, Switzerland.
Philipp KellerInstitute of Microbiology, ETH Zürich, Zürich, Switzerland.
Anna SintsovaInstitute of Microbiology, ETH Zürich, Zürich, Switzerland.
Leanid LaganenkaInstitute of Microbiology, ETH Zürich, Zürich, Switzerland.
Thomas A ScottInstitute of Microbiology, ETH Zürich, Zürich, Switzerland.
Christopher SchubertInstitute of Microbiology, ETH Zürich, Zürich, Switzerland.
Shinichi SunagawaInstitute of Microbiology, ETH Zürich, Zürich, Switzerland.
Julia A VorholtInstitute of Microbiology, ETH Zürich, Zürich, Switzerland.
Jörn PielInstitute of Microbiology, ETH Zürich, Zürich, Switzerland.
Wolf-Dietrich HardtInstitute of Microbiology, ETH Zürich, Zürich, Switzerland.
Bidong D NguyenInstitute of Microbiology, ETH Zürich, Zürich, Switzerland.ORCID 0009-0009-8201-0387

Funding

Deutsche Forschungsgemeinschaft SCHU 3606/1-1Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 10.001.588Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 310030_192567Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 51NF40_180575Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 51NF40_225148
6 · The paper itself

Abstract

Salmonella enterica serovar Typhimurium (S. Tm) is a major cause of foodborne diarrhea. However, in healthy individuals, the microbiota typically restricts the growth of incoming pathogens, a protective mechanism termed colonization resistance (CR). To circumvent CR, Salmonella strains can utilize private nutrients that remain untapped by the resident microbiota. However, the metabolic pathways and environmental niches promoting pathogen growth are still not completely understood. Here, we investigate the significance of the gfr operon in gut colonization of S. Tm, which is essential for the utilization of fructoselysine (FL) and glucoselysine (GL). These Amadori compounds are present in heated foods with high protein and carbohydrate contents. We detected FL in both mouse chow and the intestinal tract of mice and showed that gfr mutants are attenuated during the initial phase of colonization in the murine model. Experiments in gnotobiotic mice and competition experiments with Escherichia coli suggest that gfr-dependent fitness advantage is context-dependent. We conclude that dietary Amadori products like FL can support S. Tm gut colonization, depending on the metabolic capacities of the microbiota.

Indexed as

Salmonella typhimuriumAnimalsBacterial ProteinsFemaleGastrointestinal MicrobiomeGastrointestinal TractGerm-Free LifeMiceMice, Inbred C57BLOperonSalmonella InfectionsBacterial ProteinsAmadori productscolonization resistancedietfructoselysine/glucoselysinemicrobial competition

Identifiers

PMID41078336
PMCPMC12675984

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.