ArticleScientific data2025
Telomere-to-telomere gapless genome assembly of Acorus tatarinowii.
Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
Acorus tatarinowii, a medicinal herb belonging to the Acoraceae family, is widely used in aromatherapy and cognitive enhancement due to its rich repertoire of over 160 natural products. Phylogenetically, it holds a key position as the sister lineage to all other monocots, underscoring the need for a high-quality genome assembly to facilitate in-depth evolutionary and functional studies. In this study, we present a telomere-to-telomere (T2T) genome assembly of A. tatarinowii, spanning 359.36 Mb with a scaffold N50 of 32.54 Mb. The assembly demonstrates reference-grade quality, supported by a consensus quality value (QV) of 45.41 and a long terminal repeat assembly index (LAI) of 10.04. BUSCO analysis of the genome revealed 97.6% complete alignments, confirming the assembly's high continuity and completeness. Genome annotation identified 24,879 protein-coding genes, with repetitive sequences comprising 57.51% of the genome. BUSCO assessment of gene models further validated 97.2% completeness. This high-quality T2T genome assembly not only elucidates the genomic features of this early-diverging monocot species but also provides a robust foundation for future functional genomics research.
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