Evidence map›Paper›PMID 41103544›Full record

ArticleBioinformatics advances2025

TAILcaller: an R package for analyzing differences in poly(A) tail length for Oxford Nanopore RNA sequencing.

Mateusz Maździarz, Łukasz Paukszto, Jakub Sawicki

Abstract read
In one paragraph

Article in Bioinformatics advances, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Mateusz MaździarzDepartment of Botany and Evolutionary Ecology, University of Warmia and Mazury in Olsztyn, Olsztyn 10-719, Poland.ORCID https://orcid.org/0000-0002-7278-4604
Łukasz PauksztoDepartment of Botany and Evolutionary Ecology, University of Warmia and Mazury in Olsztyn, Olsztyn 10-719, Poland.ORCID https://orcid.org/0000-0002-3618-1064
Jakub SawickiDepartment of Botany and Evolutionary Ecology, University of Warmia and Mazury in Olsztyn, Olsztyn 10-719, Poland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Motivation: Changes in poly(A) tail length were identified as a key post-transcriptional mechanism that controls protein synthesis. The length of the poly(A) tail was shown to directly impact mRNA stability and translation, broadening its regulatory scope. A thorough understanding of poly(A) tail dynamics is considered essential for deciphering how genes are regulated and what role they play in cellular function. Therefore, we developed Results: The Availability and implementation:

Identifiers

PMID41103544
PMCPMC12527348

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.