Evidence map›Paper›PMID 41135878›Full record

ArticleJournal of advanced research2026

Divergence between neural and retinal lineage specification during human brain development by signal transduction.

Ki Hong Nam, Sang Ah Yi, Lin-Fan Xiao, Jae Sung Noh, Min Gyu Lee, Jae Kyun Jeong, Hyewon Jung, Ning-Yi Shao, Jeung-Whan Han, Jaecheol Lee

Abstract read
In one paragraph

Article in Journal of advanced research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ki Hong NamSchool of Pharmacy, Sungkyunkwan University, Suwon 16419, Republic of Korea; Cell Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Sang Ah YiSchool of Pharmacy, Sungkyunkwan University, Suwon 16419, Republic of Korea; Department of Biopharmaceutical Convergence, Sungkyunkwan University, Suwon 16419, Republic of Korea.
Lin-Fan XiaoDepartment of Biomedical Sciences, Faculty of Health Sciences, University of Macau, Macau Special Administrative Region (SAR), People's Republic of China.
Jae Sung NohSchool of Pharmacy, Sungkyunkwan University, Suwon 16419, Republic of Korea; Epigenome Dynamics Control Research Center (EDCRC), Sungkyunkwan University, Suwon 16419, Republic of Korea.
Min Gyu LeeSchool of Pharmacy, Sungkyunkwan University, Suwon 16419, Republic of Korea; Epigenome Dynamics Control Research Center (EDCRC), Sungkyunkwan University, Suwon 16419, Republic of Korea.
Jae Kyun JeongSchool of Pharmacy, Sungkyunkwan University, Suwon 16419, Republic of Korea; Epigenome Dynamics Control Research Center (EDCRC), Sungkyunkwan University, Suwon 16419, Republic of Korea.
Hyewon JungSchool of Pharmacy, Sungkyunkwan University, Suwon 16419, Republic of Korea; Department of Biopharmaceutical Convergence, Sungkyunkwan University, Suwon 16419, Republic of Korea.
Ning-Yi ShaoDepartment of Biomedical Sciences, Faculty of Health Sciences, University of Macau, Macau Special Administrative Region (SAR), People's Republic of China; MoE Frontiers Science Center for Precision Oncology, University of Macau, Taipa, Macau SAR, China. Electronic address: nshao@um.edu.mo.
Jeung-Whan HanSchool of Pharmacy, Sungkyunkwan University, Suwon 16419, Republic of Korea; Epigenome Dynamics Control Research Center (EDCRC), Sungkyunkwan University, Suwon 16419, Republic of Korea; Biomedical Institute for Convergence at SKKU (BICS), Sungkyunkwan University, Suwon 16419, Republic of Korea. Electronic address: jhhan551@skku.edu.
Jaecheol LeeSchool of Pharmacy, Sungkyunkwan University, Suwon 16419, Republic of Korea; Department of Biopharmaceutical Convergence, Sungkyunkwan University, Suwon 16419, Republic of Korea; Epigenome Dynamics Control Research Center (EDCRC), Sungkyunkwan University, Suwon 16419, Republic of Korea; Biomedical Institute for Convergence at SKKU (BICS), Sungkyunkwan University, Suwon 16419, Republic of Korea; Department of Biohealth Regulatory Science, Sungkyunkwan University, Suwon 16419, Republic of Korea. Electronic address: jaecheol@skku.edu.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

introductionThe physiological functions of p70 S6 kinase 1 (S6K1) have been extensively studied in S6K1-deficient mice. However, there is limited evidence demonstrating the influence of S6K1 deletion on human brain development.

objectivesIn this study, we identify the role of S6K1 in human brain development utilizing genetically engineered human embryonic stem cell-derived brain organoids.

methodsDorsal forebrain organoids generated from S6K1-depleted human embryonic stem cells (hESCs) were analyzed through single-cell RNA sequencing at early (5 weeks) and late (14 weeks) stages. In addition, the brain organoids derived from co-cultured S6K1-deleted and wild-type hESCs were subjected to ATAC-sequencing.

resultsGenetic deletion of S6K1 significantly decreases the size of the dorsal forebrain organoids in the early stages. Single-cell RNA sequencing analysis shows an abnormal emergence of retinal cell lineages in S6K1-deleted brain organoids, which diverges from cortical neurons in the early stage, eventually leading to a decrease in the proportion of mature cortical neurons. The chromatin accessibility analysis of co-cultured brain organoids shows that retinal specification in S6K1 knockout organoids was due to non-cell-autonomous function, whereas incomplete maturation of neurons results from cell-autonomous function.

conclusionDepletion of S6K1 signaling in the early stage of human brain development drives the formation of retinal cells distinct from cortical neurons. Our findings demonstrate that S6K1 signaling fine-tunes neuronal and retinal lineage specification during brain development.

Indexed as

BrainCell LineageNeuronsRetinaSignal TransductionAnimalsCell DifferentiationHuman Embryonic Stem CellsHumansNeurodevelopmentOrganoidsBrain organoidsHuman brain developmentNeuronal lineage specificationRetinal cell emergenceS6K1

Identifiers

PMID41135878
PMCPMC13316595

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.