Evidence map›Paper›PMID 41137770›Full record

ArticleThe journal of physical chemistry. B2025

Synergistic Interplay of Stimulatory Cofactors in the Activation of Adenylyl Cyclase Isoform 1.

Tongtong Li, Shreya Krishnan, Talon Hicks, Jianing Li

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Tongtong LiBorch Department of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, Indiana 47907, United States.ORCID 0009-0001-9724-7418
Shreya KrishnanBorch Department of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, Indiana 47907, United States.ORCID 0009-0008-6546-2034
Talon HicksBorch Department of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, Indiana 47907, United States.
Jianing LiBorch Department of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, Indiana 47907, United States.ORCID 0000-0002-0143-8894

Funding

Structure, Mechanism, and Regulation of PACAP/VIP GPCR SubtypesR01GM129431 · NIGMS · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI LI, JIANING · 2018 to 2022
$1.7M
Precision Design of Antimicrobial Peptides Against Bacterial InfectionsR01GM143370 · NIGMS · PURDUE UNIVERSITY · PI LI, JIANING · 2022 to 2025
$1.2M
NIGMS NIH HHS R01 GM129431NIGMS NIH HHS R01 GM143370
6 · The paper itself

Abstract

Adenylyl Cyclase isoform 1 (AC1), responsible for synthesizing the signaling molecule cyclic adenosine monophosphate (cAMP), is key in synaptic plasticity, long-term chronic pain syndromes, osteosarcoma-associated pain, and drug abuse. The protein calmodulin (CaM) and the small molecule forskolin (Fsk) stimulate AC1 to form a catalytic site for ATP catalysis; however, molecular AC1 structural changes triggered by CaM and Fsk remain poorly understood. This study developed a computational model for AC1-cofactor complexes and used all-atom molecular dynamics (MD) simulations to determine how CaM and Fsk individually and jointly affect AC1 dynamics and assess whether they exhibit any synergistic effects. Four systems were investigated: AC1-No Partner, AC1-CaM, AC1-Fsk, and AC1-CaM-Fsk. Simulations revealed that individual and joint cofactor bindings induced unique structural changes within the regulatory C1b subdomain of AC1. CaM and Fsk binding result in a reduced cross section of the catalytic site, implying tighter binding for ATP. Notably, the results showed that the AC1-CaM-Fsk system exhibited unique features distinct from the AC1-CaM and AC1-Fsk systems, demonstrating synergistic effects of CaM and Fsk. Our understanding of AC1-cofactor interactions can guide future research toward modulating AC1 activity, potentially contributing to the development of novel treatments for AC1-associated diseases.

Indexed as

Adenylyl CyclasesCalmodulinColforsinAdenosine TriphosphateCatalytic DomainEnzyme ActivationHumansMolecular Dynamics SimulationAdenosine Triphosphateadenylyl cyclase 1Adenylyl CyclasesCalmodulinColforsinAdenylyl Cyclase 1 stimulationATP catalysisCa2+/calmodulinforskolinMD simulationssynergistic effect

Identifiers

PMID41137770
PMCPMC13181757

What Socratic holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.