Evidence map›Paper›PMID 41155393›Full record

ArticleInternational journal of molecular sciences2025

In Silico Analysis of MiRNA Regulatory Networks to Identify Potential Biomarkers for the Clinical Course of Viral Infections.

Elena V Mikheeva, Kseniya S Aulova, Georgy A Nevinsky, Anna M Timofeeva

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Elena V MikheevaSB RAS Institute of Chemical Biology and Fundamental Medicine, Novosibirsk 630090, Russia.ORCID 0009-0008-5361-9233
Kseniya S AulovaSB RAS Institute of Chemical Biology and Fundamental Medicine, Novosibirsk 630090, Russia.ORCID 0000-0001-6972-9068
Georgy A NevinskySB RAS Institute of Chemical Biology and Fundamental Medicine, Novosibirsk 630090, Russia.ORCID 0000-0002-4988-8923
Anna M TimofeevaSB RAS Institute of Chemical Biology and Fundamental Medicine, Novosibirsk 630090, Russia.ORCID 0000-0002-1270-7164

Funding

Russian Science Foundation 25-15-00010
6 · The paper itself

Abstract

MiRNA expression profiles exhibit notable alterations in numerous diseases, particularly viral infections. Consequently, miRNAs may be regarded as both therapeutic targets and markers for the development of complications. MiRNAs can significantly influence the modulation of immune responses, offering an extra layer of regulation during viral infections. In this study, miRNAs associated with viral infections were analyzed using an in silico approach. Computer modeling predicted a number of miRNAs capable of influencing the functionality of specific components of the immune system. As a result, 242 miRNAs common to the three types of infections were identified. A network of miRNA-gene regulatory interactions, encompassing 502 nodes (224 miRNAs and 278 genes) and 2236 interactions, was developed. Within this network, subnetworks were identified that are involved in the operation of specific connections in the immune response to viruses. For each step of the immune response, the miRNAs involved in governing these processes were examined. These predicted miRNAs are of particular interest for further analysis aimed at establishing the relationship between their differential expression and disease symptom severity. The obtained data lay the foundation for identifying the most promising molecules as predictive biomarkers and the subsequent development of a diagnostic system.

Indexed as

Gene Regulatory NetworksMicroRNAsVirus DiseasesBiomarkersComputational BiologyComputer SimulationGene Expression ProfilingGene Expression RegulationHumansBiomarkersMicroRNAsbiomarkersCytoscapeFlaviviridaegene network visualizationHIV-1long COVIDmiRNAmiRWalkregulatory networksSARS-CoV-2viral infection

Identifiers

PMID41155393
PMCPMC12563699

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.