Evidence map›Paper›PMID 41160897›Full record

ArticleNucleic acids research2025

Transcription factor 4 maintains endothelial cell identity by inhibiting endothelial to mesenchymal transition.

Gaopeng Xian, Rongbin Zheng, Jie Lv, Sen Zhu, Min Chen, Xinlei Gao, Shenli Yuan, Zhen Bouman Chen, Keith Youker, John P Cooke and 2 more

Erratum issuedAbstract read
In one paragraph

Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Gaopeng XianBasic and Translational Research Division, Department of Cardiology, Boston Children's Hospital, Boston, MA 02115, United States.
Rongbin ZhengBasic and Translational Research Division, Department of Cardiology, Boston Children's Hospital, Boston, MA 02115, United States.
Jie LvCenter for Bioinformatics and Computational Biology, Department of Cardiovascular Sciences, Houston Methodist Research Institute, Houston, TX 77030, United States.
Sen ZhuCenter for Bioinformatics and Computational Biology, Department of Cardiovascular Sciences, Houston Methodist Research Institute, Houston, TX 77030, United States.
Min ChenBasic and Translational Research Division, Department of Cardiology, Boston Children's Hospital, Boston, MA 02115, United States.
Xinlei GaoBasic and Translational Research Division, Department of Cardiology, Boston Children's Hospital, Boston, MA 02115, United States.
Shenli YuanBasic and Translational Research Division, Department of Cardiology, Boston Children's Hospital, Boston, MA 02115, United States.
Zhen Bouman ChenDepartment of Diabetes Complications and Metabolism, City of Hope, Duarte, CA 91010, United States.
Keith YoukerCenter for Cardiovascular Regeneration, Department of Cardiovascular Sciences, Houston Methodist Research Institute, Houston, TX 77030, United States.
John P CookeCenter for Cardiovascular Regeneration, Department of Cardiovascular Sciences, Houston Methodist Research Institute, Houston, TX 77030, United States.
Kaifu ChenBasic and Translational Research Division, Department of Cardiology, Boston Children's Hospital, Boston, MA 02115, United States.ORCID 0000-0003-1009-4357
Lili ZhangBasic and Translational Research Division, Department of Cardiology, Boston Children's Hospital, Boston, MA 02115, United States.ORCID 0000-0002-5032-7031

Funding

Reversal of Heart Failure: Role of Vascular RecoveryR01HL148338 · NHLBI · METHODIST HOSPITAL RESEARCH INSTITUTE · PI CHEN, KAIFU, COOKE, JOHN P · 2020 to 2023
$2.8M
Transcription Factor 4 Maintain Endothelial identity to Oppose Heart FailureR01HL155632 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI Lili Zhang · 2022 to 2026
$2.5M
RNA-mediated endotheliopathy in diabetic vasculopathyR35HL171550 · NHLBI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI Zhen Bouman Chen · 2024 to 2026
$2.2M
A novel role for EZH2 in A-to-I RNA editing in prostate cancerR01CA278832 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Qi Cao, Kaifu Chen · 2024 to 2026
$2.0M
Bioinformatics Techniques to Analyze Dynamic Changes of 3D GenomeR01GM138407 · NIGMS · BOSTON CHILDREN'S HOSPITAL · PI CHEN, KAIFU · 2022 to 2025
$1.8M
Role of S-nitrosylation in TransdifferentiationR01HL133254 · NHLBI · METHODIST HOSPITAL RESEARCH INSTITUTE · PI CHEN, KAIFU, COOKE, JOHN P · 2018 to 2021
$1.6M
Computational epigenetics modeling of cell identity genesR01GM125632 · NIGMS · METHODIST HOSPITAL RESEARCH INSTITUTE · PI CHEN, KAIFU · 2018 to 2021
$1.4M
Computational Technology for Single-Cell Functional GenomicsK99HG013662 · NHGRI · BOSTON CHILDREN'S HOSPITAL · PI Rongbin Zheng · 2025 to 2026
$261k
NCI NIH HHS R01 CA278832NCI NIH HHS R01CA278832NHGRI NIH HHS K99 HG013662NHGRI NIH HHS K99HG013662NHLBI NIH HHS R01 HL133254NHLBI NIH HHS R01HL133254NHLBI NIH HHS R01 HL148338NHLBI NIH HHS R01HL148338NHLBI NIH HHS R01 HL155632NHLBI NIH HHS R01HL155632NHLBI NIH HHS R35 HL171550NHLBI NIH HHS R35HL171550NIGMS NIH HHS R01 GM125632NIGMS NIH HHS R01GM125632NIGMS NIH HHS R01 GM138407NIGMS NIH HHS R01GM138407Single Ventricle Research Foundation
6 · The paper itself

Abstract

Endothelial to mesenchymal transition (EndoMT) is essential for embryonic heart development and contributes to many pathological processes. It is unclear how the balance between endothelial cell (EC) identity and EndoMT mediators is regulated to drive this transition. This study identifies transcription factor 4 (TCF4; also known as ITF2) as a critical EC identity gene. TCF4 knockdown impairs EC phenotype and function, and induces a transition towards a mesenchymal-like state. This discovery suggests that TCF4 safeguards EC identity against EndoMT. Mechanistically, TCF4 directly binds to the promoter of multiple key genes in the transforming growth factor-β (TGFβ) signaling pathway, thereby repressing their expression. TCF4 expression is consistently down-regulated in three EndoMT models. TCF4 down-regulation diminishes its inhibitory effect on the TGFβ signaling pathway, leading to pathway activation and subsequently enhancing EndoMT. This, in turn, further suppresses TCF4 expression. Consequently, the TCF4-TGFβ feedback loop is formed to intensify the EndoMT process. We demonstrate that introducing exogenous TCF4 disrupts this TCF4-TGFβ feedback loop of EndoMT, rescuing the EC phenotype and function under TGFβ stimulation, as well as ECs from human patients with heart failure. Our results reveal a key role for TCF4 in safeguarding EC identity and preventing EndoMT, suggesting a therapeutic potential of targeting TCF4 for EndoMT-related cardiovascular diseases.

Indexed as

Endothelial CellsEpithelial-Mesenchymal TransitionTranscription Factor 4AnimalsHumansHuman Umbilical Vein Endothelial CellsPromoter Regions, GeneticSignal TransductionTransforming Growth Factor betaTCF4 protein, humanTranscription Factor 4Transforming Growth Factor beta

Identifiers

PMID41160897
PMCPMC12571441

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.