Evidence map›Paper›PMID 41162396›Full record

ArticleNature communications2025

A red fluorescent genetically encoded biosensor for in vivo imaging of extracellular L-lactate dynamics.

Yuki Kamijo, Philipp Mächler, Natalie Ness, Cong Quang Vu, Tsukasa Kusakizako, Jamsad Mannuthodikayil, Zaneta Ku, Marc Boisvert, Ekaterina Grebenik, Ikumi Miyazaki and 16 more

Erratum issuedAbstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors.

Yuki KamijoDepartment of Chemistry, School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Philipp Mächler *Department of Physics, University of California San Diego, La Jolla, CA, USA.
Natalie Ness *Department of Brain Science, Imperial College London, London, UK.ORCID http://orcid.org/0000-0002-5935-7157
Cong Quang Vu *WPI Nano Life Science Institute, Kanazawa University, Kanazawa, Japan.ORCID http://orcid.org/0000-0001-7444-9060
Tsukasa Kusakizako *Department of Biological Sciences, School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.ORCID http://orcid.org/0000-0002-6186-6647
Jamsad MannuthodikayilInstitute of Biological Chemistry, Academia Sinica, Nankang, Taipei, Taiwan.
Zaneta KuDepartment of Physics, University of California San Diego, La Jolla, CA, USA.
Marc BoisvertCERVO Brain Research Center, Laval University, Québec, QC, Canada.
Ekaterina GrebenikDepartment of Neurology, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Ikumi MiyazakiDepartment of Chemistry, School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.ORCID http://orcid.org/0009-0007-6689-2493
Rina HashizumeDepartment of Chemistry, School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Haruaki SatoLaboratory of Neuropathology and Neuroscience, Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, Japan.ORCID http://orcid.org/0000-0001-8284-7317
Rui LiuDepartment of Physics, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-3634-0344
Yukiko HoriLaboratory of Neuropathology and Neuroscience, Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, Japan.ORCID http://orcid.org/0000-0002-1188-840X
Taisuke TomitaLaboratory of Neuropathology and Neuroscience, Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, Japan.ORCID http://orcid.org/0000-0002-0075-5943
Tetsuro KatayamaInstitute of Post-LED Photonics, Tokushima University, Tokushima, Japan.
Akihiro FurubeInstitute of Post-LED Photonics, Tokushima University, Tokushima, Japan.ORCID http://orcid.org/0000-0002-4682-0843
Gabriela CaraveoDepartment of Neurology, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Marie-Eve PaquetCERVO Brain Research Center, Laval University, Québec, QC, Canada.ORCID http://orcid.org/0000-0001-6982-4970
Mikhail DrobizhevDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, MT, USA.ORCID http://orcid.org/0000-0001-9072-1300
Osamu NurekiDepartment of Biological Sciences, School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Satoshi AraiWPI Nano Life Science Institute, Kanazawa University, Kanazawa, Japan.ORCID http://orcid.org/0000-0003-4807-8248
Marco BrancaccioDepartment of Brain Science, Imperial College London, London, UK.ORCID http://orcid.org/0000-0001-8053-5221
Robert E CampbellDepartment of Chemistry, School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.ORCID http://orcid.org/0000-0003-0604-092X
David KleinfeldDepartment of Physics, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-9797-4722
Yusuke NasuDepartment of Chemistry, School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan. nasu@as.edu.tw.ORCID http://orcid.org/0000-0002-3193-9104

Funding

Project 4U19NS123717 · NINDS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI LINNINGER, ANDREAS A · 2021 to 2025
$13.4M
Resilient versus fragile aspects of blood flow in the mammalian brainR35NS097265 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KLEINFELD, DAVID · 2017 to 2024
$6.8M
Resource for Multiphoton Characterization of Genetically-Encoded ProbesU24NS109107 · NINDS · MONTANA STATE UNIVERSITY - BOZEMAN · PI Mikhail Drobizhev · 2018 to 2026
$2.2M
Northern Lights collaboration for better 2-photon probesU01NS094246 · NINDS · MONTANA STATE UNIVERSITY - BOZEMAN · PI CAMPBELL, ROBERT E., DROBIZHEV, MIKHAIL · 2015 to 2017
$2.0M
Evolving a two-photon bright green fluorescent protein for neuroscienceF31NS108593 · NINDS · MONTANA STATE UNIVERSITY - BOZEMAN · PI MOLINA, ROSANA SOPHIA · 2018 to 2019
$64k
Japan Agency for Medical Research and Development (AMED) JP21dm0207073MEXT | Japan Society for the Promotion of Science (JSPS) 19H01015MEXT | Japan Society for the Promotion of Science (JSPS) 19H05633MEXT | Japan Society for the Promotion of Science (JSPS) 19K15691MEXT | Japan Society for the Promotion of Science (JSPS) 21K14738MEXT | Japan Society for the Promotion of Science (JSPS) 24K01621MEXT | JST | Core Research for Evolutional Science and Technology (CREST) JPMJCR24T6MEXT | JST | Precursory Research for Embryonic Science and Technology (PRESTO) JPMJPR22E9NINDS NIH HHS F31 NS108593NINDS NIH HHS R35 NS097265NINDS NIH HHS U01 NS094246NINDS NIH HHS U19 NS123717NINDS NIH HHS U24 NS109107
6 · The paper itself

Abstract

L-Lactate is increasingly recognized as an intercellular energy currency in mammals, but mysteries remain regarding the spatial and temporal dynamics of its release and uptake between cells via the extracellular environment. Here we introduce R-eLACCO2.1, a red fluorescent extracellular L-lactate biosensor that is superior to previously reported green fluorescent biosensors in in vivo sensitivity to increases in extracellular L-lactate and spectral orthogonality. R-eLACCO2.1 exhibits excellent fluorescence response in cultured cells, mouse brain slices, and live mice. R-eLACCO2.1 also serves as an effective fluorescence lifetime-based biosensor. Using R-eLACCO2.1, we monitor whisker stimulation and locomotion-induced changes in endogenous extracellular L-lactate in the somatosensory cortex of awake mice. To highlight the potential insights gained from in vivo measurements with R-eLACCO2.1, we perform dual-color imaging from the somatosensory cortex of actively locomoting mice. This enables us to simultaneously observe the neural activity, reported by a green fluorescent GCaMP calcium ion biosensor, and extracellular L-lactate. As the high-performance tool in the suite of extracellular L-lactate biosensors, R-eLACCO2.1 is ideally suited to delimit the emerging roles of L-lactate in mammalian metabolism.

Indexed as

Biosensing TechniquesLactic AcidLuminescent ProteinsAnimalsHumansMaleMiceMice, Inbred C57BLRed Fluorescent ProteinSomatosensory CortexVibrissaeLactic AcidLuminescent ProteinsRed Fluorescent Protein

Identifiers

PMID41162396
PMCPMC12572234

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.