Evidence map›Paper›PMID 41165296›Full record

ArticleCritical care explorations2025

Genetic Variation in the Alternative Complement Pathway Contributes to Individual Susceptibility to Bacteremia and Sepsis.

Kyle Inman, Jonathan Chernus, Myoungkeun Lee, Jonathan K Alder, Faraaz Ali Shah, Florian B Mayr, Timothy Dempsey, S Mehdi Nouraie, Charles Dela Cruz, Viviana P Ferreira and 5 more

Abstract read
In one paragraph

Article in Critical care explorations, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Kyle InmanDivision of Pulmonary, Allergy, Critical Care, and Sleep Medicine, Department of Medicine, University of Pittsburgh School of Medicine, Pittsburgh, PA.ORCID 0009-0004-6212-0662
Jonathan ChernusDepartment of Human Genetics, School of Public Health, University of Pittsburgh, Pittsburgh, PA.
Myoungkeun LeeCenter for Craniofacial and Dental Genetics, Department of Oral and Craniofacial Sciences, University of Pittsburgh School of Dental Medicine, Pittsburgh, PA.
Jonathan K AlderDivision of Pulmonary, Allergy, Critical Care, and Sleep Medicine, Department of Medicine, University of Pittsburgh School of Medicine, Pittsburgh, PA.
Faraaz Ali ShahDivision of Pulmonary, Allergy, Critical Care, and Sleep Medicine, Department of Medicine, University of Pittsburgh School of Medicine, Pittsburgh, PA.
Florian B MayrVeterans Affairs Pittsburgh Healthcare System, Pittsburgh, PA.
Timothy DempseyDivision of Pulmonary, Allergy, Critical Care, and Sleep Medicine, Department of Medicine, University of Pittsburgh School of Medicine, Pittsburgh, PA.
S Mehdi NouraieDivision of Pulmonary, Allergy, Critical Care, and Sleep Medicine, Department of Medicine, University of Pittsburgh School of Medicine, Pittsburgh, PA.
Charles Dela CruzDivision of Pulmonary, Allergy, Critical Care, and Sleep Medicine, Department of Medicine, University of Pittsburgh School of Medicine, Pittsburgh, PA.
Viviana P FerreiraDepartment of Medical Microbiology and Immunology, University of Toledo College of Medicine and Life Sciences, Toledo, OH.
Hrishikesh S KulkarniDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, University of California Los Angeles David Geffen School of Medicine, Los Angeles, CA.
Nuala J MeyerDivision of Pulmonary, Allergy, and Critical Care Medicine, Department of Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.
Patrick J StrolloDivision of Pulmonary, Allergy, Critical Care, and Sleep Medicine, Department of Medicine, University of Pittsburgh School of Medicine, Pittsburgh, PA.
Eleanor FeingoldDepartment of Human Genetics, School of Public Health, University of Pittsburgh, Pittsburgh, PA.
William BainDivision of Pulmonary, Allergy, Critical Care, and Sleep Medicine, Department of Medicine, University of Pittsburgh School of Medicine, Pittsburgh, PA.ORCID 0000-0001-8506-0552

Funding

Translational Training Program in Pulmonary Biology and MedicineT32HL007563 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Melanie Koenigshoff · 1985 to 2026
$12.3M
Lung-derived complement in pneumoniaR01HL166449 · NHLBI · WASHINGTON UNIVERSITY · PI Hrishikesh Satish Kulkarni · 2023 to 2026
$2.2M
BLRD VA IK2 BX004886NHLBI NIH HHS R01 HL166449NHLBI NIH HHS T32 HL007563
6 · The paper itself

Abstract

importanceThe alternative complement pathway is a key component of host defense against bacteremia and other infections. However, dysregulated activation can contribute to excessive inflammation and worse clinical outcomes during bacteremia and infectious syndromes such as sepsis.

objectivesWe aim to identify variants in alternative pathway (AP) genes that influence the risk for bacteremia and sepsis. DESIGN, SETTING, AND

participantsWe used summary statistics from a Veterans Affairs Million Veteran Program (MVP) genome-wide by phenome-wide association study of more than 600,000 individuals. MAIN OUTCOMES AND MEASURES: Using seven electronic health record-derived Phecodes for bacteremia or sepsis, we investigated associations with single-nucleotide polymorphisms (SNPs) in genes encoding multiple AP components. We also investigated potential regulatory SNPs near candidate genes based on expression quantitative trait loci (eQTL) data or in silico modeling (Combined Annotation Dependent Depletion and RegulomeDB scores).

resultsIn the MVP trans-ancestral meta-analysis, we identified 25 unique lead genic SNPs with a minor allele frequency of greater than 1% that were significantly associated with incidence of sepsis or bacteremia Phecodes. Most were intronic (n = 21), with four exonic variants, including one in C5AR1 (rs4804049) that has novel associations with multiple Phecodes. Outside of AP gene loci, we also identified significant associations in 14 unique SNPs with predicted regulatory effects by in silico modeling and 11 unique SNPs with eQTL data suggesting an impact on AP gene expression. Variants in complement factor B (CFB), complement factor I (CFI), and C5a receptors (C5AR1/C5AR2) accounted for most of the significant genic SNPs, while noncoding functional variants primarily affected CFB, CFD, and the C5a receptor 1 (C5AR1). CONCLUSIONS AND RELEVANCE: We identified potentially clinically relevant genetic variation in the alternative complement pathway that may contribute to individual susceptibility to bacteremia and sepsis syndromes. Further study is required to understand the mechanisms behind these associations and their clinical impacts.

Indexed as

BacteremiaComplement Pathway, AlternativeGenetic Predisposition to DiseaseGenetic VariationSepsisFemaleGenome-Wide Association StudyHumansMalePolymorphism, Single NucleotideQuantitative Trait Locialternative complement pathwaybacteremiacomplementgenetic variationsepsis

Identifiers

PMID41165296
PMCPMC12574529

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.