Evidence map›Paper›PMID 41170938›Full record

ArticleJournal of clinical microbiology2025

Genomic re-evaluation of clinical isolates reveals a structured

Kevin Li, Sonia Lacouture, Lucy A Weinert, Tsutomu Sekizaki, Daisuke Takamatsu, Antony T Vincent, Ján Matiašovic, Han Zheng, Hubert Gantelet, Marcelo Gottschalk and 1 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of clinical microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Kevin LiGroupe de recherche sur les maladies infectieuses en production animale and Centre de recherche en infectiologie porcine et avicole, Faculté de médecine vétérinaire, Université de Montréal, Saint-Hyacinthe, Québec, Canada.
Sonia LacoutureGroupe de recherche sur les maladies infectieuses en production animale and Centre de recherche en infectiologie porcine et avicole, Faculté de médecine vétérinaire, Université de Montréal, Saint-Hyacinthe, Québec, Canada.
Lucy A WeinertDepartment of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom.
Tsutomu SekizakiDepartment of Microbiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Daisuke TakamatsuDivision of Infectious Animal Disease Research, National Institute of Animal Health, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan.
Antony T VincentDépartement des Sciences Animales, Faculté des Sciences de l'Agriculture et de l'Alimentation, Université Laval, Québec, Québec, Canada.ORCID 0000-0002-1338-5785
Ján MatiašovicVeterinary Research Institute, Brno, Czech Republic.
Han ZhengNational Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Hubert GanteletCeva Biovac, Beaucouzé, France.
Marcelo GottschalkGroupe de recherche sur les maladies infectieuses en production animale and Centre de recherche en infectiologie porcine et avicole, Faculté de médecine vétérinaire, Université de Montréal, Saint-Hyacinthe, Québec, Canada.
Nahuel FittipaldiGroupe de recherche sur les maladies infectieuses en production animale and Centre de recherche en infectiologie porcine et avicole, Faculté de médecine vétérinaire, Université de Montréal, Saint-Hyacinthe, Québec, Canada.ORCID 0000-0001-9553-3798

Funding

Natural Sciences and Engineering Research Council of Canada 2022-04223
6 · The paper itself

Abstract

Accurate species-level identification among IMPORTANCE: Several new species closely related genetically to

Indexed as

Cattle DiseasesGenome, BacterialStreptococcal InfectionsStreptococcus suisSwine DiseasesAnimalsCattleGenomicsPhylogenySpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationSwineWhole Genome Sequencingclinical isolatesgenome-based diagnosticsMALDI-TOF MSphylogenomicsrecN genespecies misidentificationStreptococcus suis complexswine pathogenstaxonomic reclassificationveterinary microbiology

Identifiers

PMID41170938
PMCPMC12710308

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.