Evidence map›Paper›PMID 41174262›Full record

ArticleEMBO reports2025

GABARAP proteins regulate the packaging of HIV-1 genomic RNA into virions.

Marjory Palaric, Margaux Versapuech, Delphine Judith, Corentin Aubé, Marjorie Leduc, Jacques Dutrieux, Emilie-Fleur Gautier, Jean-Christophe Paillart, Sarah Gallois-Montbrun, Clarisse Berlioz-Torrent

Abstract read
In one paragraph

Article in EMBO reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Marjory PalaricUniversité Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.ORCID 0009-0000-2955-7468
Margaux VersapuechUniversité Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.
Delphine JudithUniversité Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.
Corentin AubéUniversité Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.
Marjorie LeducProteom'IC facility, Université Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.ORCID 0000-0002-4049-3976
Jacques DutrieuxUniversité Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.ORCID 0000-0003-4416-6136
Emilie-Fleur GautierProteom'IC facility, Université Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.
Jean-Christophe PaillartUniversité de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, UPR 9002, Strasbourg, France.ORCID 0000-0003-1647-8917
Sarah Gallois-MontbrunUniversité Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.ORCID 0000-0002-7870-1814
Clarisse Berlioz-TorrentUniversité Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France. clarisse.berlioz@inserm.fr.ORCID 0000-0002-5782-8154

Funding

Agence Nationale de Recherches sur le Sida et les Hépatites Virales (ANRS) ECTZ158570Agence Nationale de Recherches sur le Sida et les Hépatites Virales (ANRS) ECTZ243795Agence Nationale de Recherches sur le Sida et les Hépatites Virales (ANRS) ECTZ60924Fondation pour la Recherche Médicale (FRM) FDT202304016406Sidaction 2021-2-FJC-13113
6 · The paper itself

Abstract

In addition to their role in canonical autophagy, autophagy proteins (ATG) contribute to various cellular processes, including phagocytosis, membrane remodeling, and vesicle secretion. Several viruses also exploit components of the autophagy pathway for their own replication. Here, we explore the role of ATG proteins in HIV-1 assembly. Postulating that host proteins crucial for virion assembly are present at the assembly site and can be incorporated within virions, we analyze the proteome of HIV-1 preparations using mass spectrometry. We identify an enrichment of macroautophagy-related terms, notably 3 of the 6 ATG8 (LC3/GABARAP) proteins. Functional studies reveal that GABARAP proteins are critical for the production of infectious virions. Knockout of GABARAP proteins reduces the packaging of viral genomic RNA (gRNA) into particles, impairing virion infectivity. GABARAPL1 associates with gRNA and interacts with Gag in an RNA-dependent manner. Additionally, GABARAP knockout increases cellular Gag:gRNA complexes and decreases gRNA association with membranes, suggesting that GABARAP proteins regulate gRNA fate during HIV-1 assembly by facilitating its packaging. This study uncovers a novel role for GABARAP proteins in HIV-1 genome packaging.

Indexed as

Adaptor Proteins, Signal TransducingHIV-1Microtubule-Associated ProteinsRNA, ViralViral Genome PackagingVirionVirus AssemblyApoptosis Regulatory ProteinsAutophagyAutophagy-Related Protein 8 Familygag Gene Products, Human Immunodeficiency VirusHEK293 CellsHeLa CellsHumansAdaptor Proteins, Signal TransducingApoptosis Regulatory ProteinsAutophagy-Related Protein 8 FamilyGABARAPL1 protein, humanGABARAP protein, humangag Gene Products, Human Immunodeficiency VirusMicrotubule-Associated ProteinsRNA, ViralAutophagy ProteinGABARAPGenome PackagingHIV-1RNA

Identifiers

PMID41174262
PMCPMC12678799

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.